Hb_007765_050

Information

Type -
Description -
Location Contig7765: 39007-41138
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022815mg
description hypothetical protein
nr
ID XP_012068417.1
description PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 isoform X1 [Jatropha curcas]
swissprot
ID Q5XF09
description Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1
trembl
ID M5W291
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022815mg PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sugar phosphate phosphate translocator at3g11320

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57827: 39259-39783
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007765_050 0.0 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 isoform X1 [Jatropha curcas]
2 Hb_001584_210 0.1761926446 - - PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Jatropha curcas]
3 Hb_000898_090 0.1786332024 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105633600 isoform X1 [Jatropha curcas]
4 Hb_002003_130 0.1790056285 - - hypothetical protein CISIN_1g027843mg [Citrus sinensis]
5 Hb_003849_050 0.1808150181 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002477_020 0.1858358373 - - PREDICTED: uncharacterized protein LOC105631402 [Jatropha curcas]
7 Hb_001195_290 0.1859858519 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
8 Hb_000029_330 0.1866333768 - - PREDICTED: protein TIC 62, chloroplastic [Jatropha curcas]
9 Hb_007044_270 0.1874002232 - - PREDICTED: uncharacterized protein LOC105638707 isoform X2 [Jatropha curcas]
10 Hb_000856_280 0.191316979 - - PREDICTED: uncharacterized protein LOC105640491 [Jatropha curcas]
11 Hb_010068_090 0.1919755106 - - hypothetical protein JCGZ_00885 [Jatropha curcas]
12 Hb_003602_100 0.1932310607 - - Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus communis]
13 Hb_005063_060 0.1938013337 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105647704 [Jatropha curcas]
14 Hb_008112_020 0.1967573105 - - PREDICTED: magnesium transporter MRS2-11, chloroplastic [Jatropha curcas]
15 Hb_000906_080 0.1968770689 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
16 Hb_006472_040 0.1969639214 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
17 Hb_001775_100 0.1977077443 - - PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Jatropha curcas]
18 Hb_000317_180 0.1979527446 - - PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Jatropha curcas]
19 Hb_011282_040 0.1987919322 - - Sec14 cytosolic factor, putative [Ricinus communis]
20 Hb_005976_070 0.1990483305 - - triacylglycerol lipase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007765_050 Hb_007765_050 Hb_001584_210 Hb_001584_210 Hb_007765_050--Hb_001584_210 Hb_000898_090 Hb_000898_090 Hb_007765_050--Hb_000898_090 Hb_002003_130 Hb_002003_130 Hb_007765_050--Hb_002003_130 Hb_003849_050 Hb_003849_050 Hb_007765_050--Hb_003849_050 Hb_002477_020 Hb_002477_020 Hb_007765_050--Hb_002477_020 Hb_001195_290 Hb_001195_290 Hb_007765_050--Hb_001195_290 Hb_011344_030 Hb_011344_030 Hb_001584_210--Hb_011344_030 Hb_001584_210--Hb_002003_130 Hb_002333_040 Hb_002333_040 Hb_001584_210--Hb_002333_040 Hb_007044_270 Hb_007044_270 Hb_001584_210--Hb_007044_270 Hb_001517_010 Hb_001517_010 Hb_001584_210--Hb_001517_010 Hb_001584_210--Hb_001195_290 Hb_134949_010 Hb_134949_010 Hb_000898_090--Hb_134949_010 Hb_000029_330 Hb_000029_330 Hb_000898_090--Hb_000029_330 Hb_000898_090--Hb_001195_290 Hb_007803_040 Hb_007803_040 Hb_000898_090--Hb_007803_040 Hb_000898_090--Hb_001517_010 Hb_000898_090--Hb_001584_210 Hb_004128_170 Hb_004128_170 Hb_002003_130--Hb_004128_170 Hb_002003_130--Hb_007044_270 Hb_000077_380 Hb_000077_380 Hb_002003_130--Hb_000077_380 Hb_005063_060 Hb_005063_060 Hb_002003_130--Hb_005063_060 Hb_000098_040 Hb_000098_040 Hb_002003_130--Hb_000098_040 Hb_011649_010 Hb_011649_010 Hb_003849_050--Hb_011649_010 Hb_002814_010 Hb_002814_010 Hb_003849_050--Hb_002814_010 Hb_000723_320 Hb_000723_320 Hb_003849_050--Hb_000723_320 Hb_002475_060 Hb_002475_060 Hb_003849_050--Hb_002475_060 Hb_001252_030 Hb_001252_030 Hb_003849_050--Hb_001252_030 Hb_010721_020 Hb_010721_020 Hb_003849_050--Hb_010721_020 Hb_009296_030 Hb_009296_030 Hb_002477_020--Hb_009296_030 Hb_000317_180 Hb_000317_180 Hb_002477_020--Hb_000317_180 Hb_022137_050 Hb_022137_050 Hb_002477_020--Hb_022137_050 Hb_002477_020--Hb_134949_010 Hb_002477_020--Hb_001195_290 Hb_002477_020--Hb_000029_330 Hb_006472_040 Hb_006472_040 Hb_001195_290--Hb_006472_040 Hb_001195_290--Hb_001517_010 Hb_008112_020 Hb_008112_020 Hb_001195_290--Hb_008112_020 Hb_005210_010 Hb_005210_010 Hb_001195_290--Hb_005210_010 Hb_001268_170 Hb_001268_170 Hb_001195_290--Hb_001268_170 Hb_001195_290--Hb_134949_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0249458 0.245267 0.166182 0.0248964 0.028334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0447584 0 0 0.636437

CAGE analysis