Hb_012691_020

Information

Type -
Description -
Location Contig12691: 9888-10325
Sequence    

Annotation

kegg
ID sot:102580394
description MFP1 attachment factor 1-like
nr
ID XP_012079322.1
description PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas]
swissprot
ID Q9M7N6
description MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1
trembl
ID A0A067KJJ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12470 PE=4 SV=1
Gene Ontology
ID GO:0005634
description mfp1 attachment factor 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08261: 9908-10107
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012691_020 0.0 - - PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas]
2 Hb_003992_020 0.13892222 - - PREDICTED: phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Jatropha curcas]
3 Hb_001205_040 0.1425498969 - - unnamed protein product [Vitis vinifera]
4 Hb_048476_130 0.1436683692 - - scab resistance family protein [Populus trichocarpa]
5 Hb_003750_120 0.1553258487 - - PREDICTED: uncharacterized protein LOC105112992 [Populus euphratica]
6 Hb_001195_550 0.1567399605 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
7 Hb_001159_090 0.1587082821 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
8 Hb_001823_090 0.1591616046 - - conserved hypothetical protein [Ricinus communis]
9 Hb_006922_020 0.161582182 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
10 Hb_001366_290 0.1623955552 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
11 Hb_000638_240 0.1635665768 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Prunus mume]
12 Hb_001989_030 0.1648651138 - - PREDICTED: copper transport protein ATX1 [Jatropha curcas]
13 Hb_128196_010 0.1659764362 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000735_060 0.1664088259 - - PREDICTED: U-box domain-containing protein 9 [Jatropha curcas]
15 Hb_001307_020 0.1680057974 - - electron carrier, putative [Ricinus communis]
16 Hb_000418_170 0.1689492274 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
17 Hb_001157_050 0.1692012977 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
18 Hb_169893_010 0.1698309675 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
19 Hb_000010_440 0.1702555451 - - PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas]
20 Hb_001863_010 0.1705029961 - - PREDICTED: classical arabinogalactan protein 4-like [Jatropha curcas]

Gene co-expression network

sample Hb_012691_020 Hb_012691_020 Hb_003992_020 Hb_003992_020 Hb_012691_020--Hb_003992_020 Hb_001205_040 Hb_001205_040 Hb_012691_020--Hb_001205_040 Hb_048476_130 Hb_048476_130 Hb_012691_020--Hb_048476_130 Hb_003750_120 Hb_003750_120 Hb_012691_020--Hb_003750_120 Hb_001195_550 Hb_001195_550 Hb_012691_020--Hb_001195_550 Hb_001159_090 Hb_001159_090 Hb_012691_020--Hb_001159_090 Hb_000329_720 Hb_000329_720 Hb_003992_020--Hb_000329_720 Hb_043552_010 Hb_043552_010 Hb_003992_020--Hb_043552_010 Hb_000375_260 Hb_000375_260 Hb_003992_020--Hb_000375_260 Hb_003935_040 Hb_003935_040 Hb_003992_020--Hb_003935_040 Hb_000005_360 Hb_000005_360 Hb_003992_020--Hb_000005_360 Hb_009252_080 Hb_009252_080 Hb_003992_020--Hb_009252_080 Hb_005542_070 Hb_005542_070 Hb_001205_040--Hb_005542_070 Hb_002781_040 Hb_002781_040 Hb_001205_040--Hb_002781_040 Hb_000718_060 Hb_000718_060 Hb_001205_040--Hb_000718_060 Hb_001544_090 Hb_001544_090 Hb_001205_040--Hb_001544_090 Hb_012368_050 Hb_012368_050 Hb_001205_040--Hb_012368_050 Hb_001059_110 Hb_001059_110 Hb_048476_130--Hb_001059_110 Hb_048476_130--Hb_003992_020 Hb_048476_130--Hb_005542_070 Hb_048476_130--Hb_002781_040 Hb_003893_180 Hb_003893_180 Hb_048476_130--Hb_003893_180 Hb_005496_040 Hb_005496_040 Hb_003750_120--Hb_005496_040 Hb_000003_750 Hb_000003_750 Hb_003750_120--Hb_000003_750 Hb_003750_120--Hb_001159_090 Hb_001007_020 Hb_001007_020 Hb_003750_120--Hb_001007_020 Hb_002045_210 Hb_002045_210 Hb_003750_120--Hb_002045_210 Hb_000418_110 Hb_000418_110 Hb_003750_120--Hb_000418_110 Hb_169893_010 Hb_169893_010 Hb_001195_550--Hb_169893_010 Hb_008686_010 Hb_008686_010 Hb_001195_550--Hb_008686_010 Hb_070498_010 Hb_070498_010 Hb_001195_550--Hb_070498_010 Hb_002301_400 Hb_002301_400 Hb_001195_550--Hb_002301_400 Hb_001195_550--Hb_001159_090 Hb_002639_050 Hb_002639_050 Hb_001195_550--Hb_002639_050 Hb_001159_090--Hb_000375_260 Hb_001159_090--Hb_002301_400 Hb_001157_050 Hb_001157_050 Hb_001159_090--Hb_001157_050 Hb_006196_030 Hb_006196_030 Hb_001159_090--Hb_006196_030 Hb_000359_100 Hb_000359_100 Hb_001159_090--Hb_000359_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0714129 0.796073 3.44677 3.27907 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.396831 0 0.502488 1.19576

CAGE analysis