Hb_000375_260

Information

Type -
Description -
Location Contig375: 275199-276976
Sequence    

Annotation

kegg
ID tcc:TCM_046679
description UDP-glucosyl transferase 85A2
nr
ID AEO45781.1
description cyanohydrin UDP-glucosyltransferase UGT85K4 [Manihot esculenta]
swissprot
ID F8WKW1
description 7-deoxyloganetin glucosyltransferase OS=Gardenia jasminoides GN=UGT85A24 PE=1 SV=1
trembl
ID G3FIN8
description Cyanohydrin UDP-glucosyltransferase UGT85K4 OS=Manihot esculenta PE=2 SV=1
Gene Ontology
ID GO:0047213
description 7-deoxyloganetin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38262: 275072-276981
cDNA
(Sanger)
(ID:Location)		 002_A13.ab1: 276082-276946 , 003_G10.ab1: 276042-276946 , 003_I20.ab1: 276051-276940 , 006_I14.ab1: 276027-276946 , 009_K24.ab1: 276031-276940 , 011_C01.ab1: 275640-276523 , 016_K20.ab1: 276131-276944 , 016_O01.ab1: 275642-276131 , 028_M24.ab1: 276059-276946 , 032_M04.ab1: 276062-276946 , 033_M24.ab1: 276085-276944 , 040_E08.ab1: 276006-276946 , 044_D17.ab1: 276103-276940 , 045_M04.ab1: 275264-275523 , 048_F16.ab1: 276058-276946 , 050_L10.ab1: 276141-276944

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000375_260 0.0 - - cyanohydrin UDP-glucosyltransferase UGT85K4 [Manihot esculenta]
2 Hb_001159_090 0.0543368659 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
3 Hb_001709_090 0.0811265609 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
4 Hb_043552_010 0.0908294294 - - PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B isoform X1 [Jatropha curcas]
5 Hb_006120_130 0.0961968392 - - -
6 Hb_002028_270 0.0972147131 - - Pectinesterase-1 precursor, putative [Ricinus communis]
7 Hb_003992_020 0.1018630367 - - PREDICTED: phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Jatropha curcas]
8 Hb_000359_100 0.1046765574 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004005_060 0.1059286579 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]
10 Hb_000345_230 0.1072156973 - - -
11 Hb_003935_040 0.1075600109 transcription factor TF Family: MIKC PREDICTED: MADS-box protein SVP [Jatropha curcas]
12 Hb_009252_080 0.1085111556 - - Polygalacturonase-1 non-catalytic subunit beta precursor, putative [Ricinus communis]
13 Hb_006196_030 0.1085479444 - - PREDICTED: uncharacterized protein LOC105650679 [Jatropha curcas]
14 Hb_000862_050 0.1108384924 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
15 Hb_001195_550 0.1137721256 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
16 Hb_003750_120 0.1150550565 - - PREDICTED: uncharacterized protein LOC105112992 [Populus euphratica]
17 Hb_000329_720 0.1169056509 transcription factor TF Family: ERF hypothetical protein POPTR_0014s05500g [Populus trichocarpa]
18 Hb_000300_190 0.1177645141 - - PREDICTED: uncharacterized protein LOC105632566 [Jatropha curcas]
19 Hb_007126_010 0.1178993128 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
20 Hb_050898_030 0.1182108416 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000375_260 Hb_000375_260 Hb_001159_090 Hb_001159_090 Hb_000375_260--Hb_001159_090 Hb_001709_090 Hb_001709_090 Hb_000375_260--Hb_001709_090 Hb_043552_010 Hb_043552_010 Hb_000375_260--Hb_043552_010 Hb_006120_130 Hb_006120_130 Hb_000375_260--Hb_006120_130 Hb_002028_270 Hb_002028_270 Hb_000375_260--Hb_002028_270 Hb_003992_020 Hb_003992_020 Hb_000375_260--Hb_003992_020 Hb_002301_400 Hb_002301_400 Hb_001159_090--Hb_002301_400 Hb_001157_050 Hb_001157_050 Hb_001159_090--Hb_001157_050 Hb_006196_030 Hb_006196_030 Hb_001159_090--Hb_006196_030 Hb_003750_120 Hb_003750_120 Hb_001159_090--Hb_003750_120 Hb_000359_100 Hb_000359_100 Hb_001159_090--Hb_000359_100 Hb_009252_080 Hb_009252_080 Hb_001709_090--Hb_009252_080 Hb_001709_090--Hb_043552_010 Hb_001056_040 Hb_001056_040 Hb_001709_090--Hb_001056_040 Hb_000345_230 Hb_000345_230 Hb_001709_090--Hb_000345_230 Hb_001709_090--Hb_002028_270 Hb_043552_010--Hb_009252_080 Hb_000162_190 Hb_000162_190 Hb_043552_010--Hb_000162_190 Hb_000310_040 Hb_000310_040 Hb_043552_010--Hb_000310_040 Hb_043552_010--Hb_003992_020 Hb_000289_020 Hb_000289_020 Hb_006120_130--Hb_000289_020 Hb_000862_050 Hb_000862_050 Hb_006120_130--Hb_000862_050 Hb_008725_100 Hb_008725_100 Hb_006120_130--Hb_008725_100 Hb_006120_130--Hb_043552_010 Hb_006120_130--Hb_002028_270 Hb_001971_040 Hb_001971_040 Hb_002028_270--Hb_001971_040 Hb_006810_040 Hb_006810_040 Hb_002028_270--Hb_006810_040 Hb_000878_080 Hb_000878_080 Hb_002028_270--Hb_000878_080 Hb_002028_270--Hb_000359_100 Hb_004005_060 Hb_004005_060 Hb_002028_270--Hb_004005_060 Hb_002028_270--Hb_000289_020 Hb_000329_720 Hb_000329_720 Hb_003992_020--Hb_000329_720 Hb_003935_040 Hb_003935_040 Hb_003992_020--Hb_003935_040 Hb_000005_360 Hb_000005_360 Hb_003992_020--Hb_000005_360 Hb_003992_020--Hb_009252_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.40714 182.368 755.618 964.986 2.1222 3.15119
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.109754 0.0431755 0 105.225 181.678

CAGE analysis