Hb_003750_120

Information

Type -
Description -
Location Contig3750: 84550-87717
Sequence    

Annotation

kegg
ID pop:POPTR_0017s02960g
description hypothetical protein
nr
ID XP_011007254.1
description PREDICTED: uncharacterized protein LOC105112992 [Populus euphratica]
swissprot
ID Q0WNW4
description Myosin-binding protein 3 OS=Arabidopsis thaliana GN=MYOB3 PE=1 SV=1
trembl
ID A0A067KAB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13446 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38293: 83988-87642
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003750_120 0.0 - - PREDICTED: uncharacterized protein LOC105112992 [Populus euphratica]
2 Hb_005496_040 0.0800130365 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]
3 Hb_000003_750 0.0840017514 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
4 Hb_001159_090 0.0865238577 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
5 Hb_001007_020 0.0884158583 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
6 Hb_002045_210 0.0926005258 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
7 Hb_000418_110 0.092708258 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
8 Hb_000359_100 0.0956799409 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001056_040 0.0970561525 - - hypothetical protein POPTR_0006s04450g [Populus trichocarpa]
10 Hb_001157_050 0.0997431819 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
11 Hb_070498_010 0.1003900531 - - receptor kinase, putative [Ricinus communis]
12 Hb_015048_020 0.1021918061 - - PREDICTED: myb-like protein D [Jatropha curcas]
13 Hb_000342_040 0.1022445004 - - pollen specific protein sf21, putative [Ricinus communis]
14 Hb_008686_010 0.1042143059 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000112_080 0.1057500109 - - PREDICTED: glutamate receptor 2.1-like [Populus euphratica]
16 Hb_169893_010 0.1069561901 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
17 Hb_000032_420 0.1078611697 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
18 Hb_007218_040 0.110774343 - - Leucine-rich repeat transmembrane protein kinase protein, putative [Theobroma cacao]
19 Hb_002301_400 0.1116180078 - - structural constituent of cell wall, putative [Ricinus communis]
20 Hb_001709_090 0.1119518442 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]

Gene co-expression network

sample Hb_003750_120 Hb_003750_120 Hb_005496_040 Hb_005496_040 Hb_003750_120--Hb_005496_040 Hb_000003_750 Hb_000003_750 Hb_003750_120--Hb_000003_750 Hb_001159_090 Hb_001159_090 Hb_003750_120--Hb_001159_090 Hb_001007_020 Hb_001007_020 Hb_003750_120--Hb_001007_020 Hb_002045_210 Hb_002045_210 Hb_003750_120--Hb_002045_210 Hb_000418_110 Hb_000418_110 Hb_003750_120--Hb_000418_110 Hb_000342_040 Hb_000342_040 Hb_005496_040--Hb_000342_040 Hb_008686_010 Hb_008686_010 Hb_005496_040--Hb_008686_010 Hb_000032_420 Hb_000032_420 Hb_005496_040--Hb_000032_420 Hb_004117_090 Hb_004117_090 Hb_005496_040--Hb_004117_090 Hb_005496_040--Hb_000003_750 Hb_011918_070 Hb_011918_070 Hb_000003_750--Hb_011918_070 Hb_001157_050 Hb_001157_050 Hb_000003_750--Hb_001157_050 Hb_070498_010 Hb_070498_010 Hb_000003_750--Hb_070498_010 Hb_015048_020 Hb_015048_020 Hb_000003_750--Hb_015048_020 Hb_000375_260 Hb_000375_260 Hb_001159_090--Hb_000375_260 Hb_002301_400 Hb_002301_400 Hb_001159_090--Hb_002301_400 Hb_001159_090--Hb_001157_050 Hb_006196_030 Hb_006196_030 Hb_001159_090--Hb_006196_030 Hb_000359_100 Hb_000359_100 Hb_001159_090--Hb_000359_100 Hb_001007_020--Hb_000418_110 Hb_002894_060 Hb_002894_060 Hb_001007_020--Hb_002894_060 Hb_000134_130 Hb_000134_130 Hb_001007_020--Hb_000134_130 Hb_174639_010 Hb_174639_010 Hb_001007_020--Hb_174639_010 Hb_003894_110 Hb_003894_110 Hb_001007_020--Hb_003894_110 Hb_001349_050 Hb_001349_050 Hb_001007_020--Hb_001349_050 Hb_001056_040 Hb_001056_040 Hb_002045_210--Hb_001056_040 Hb_002045_210--Hb_005496_040 Hb_000321_170 Hb_000321_170 Hb_002045_210--Hb_000321_170 Hb_002045_210--Hb_000342_040 Hb_000022_080 Hb_000022_080 Hb_002045_210--Hb_000022_080 Hb_000418_110--Hb_002894_060 Hb_000418_110--Hb_000134_130 Hb_019516_010 Hb_019516_010 Hb_000418_110--Hb_019516_010 Hb_007632_160 Hb_007632_160 Hb_000418_110--Hb_007632_160 Hb_098315_060 Hb_098315_060 Hb_000418_110--Hb_098315_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0441928 0.90353 8.14401 9.3816 0.0439892 0.0524931
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.117504 0 0.806401 2.90673

CAGE analysis