Hb_000022_080

Information

Type -
Description -
Location Contig22: 118090-127491
Sequence    

Annotation

kegg
ID pop:POPTR_0001s43080g
description hypothetical protein
nr
ID XP_012075543.1
description PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
swissprot
ID O64481
description Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana GN=SBT2.5 PE=2 SV=1
trembl
ID A0A067KFH4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09165 PE=3 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000022_080 0.0 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
2 Hb_005496_040 0.0945046694 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]
3 Hb_002045_210 0.1010160651 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
4 Hb_004195_070 0.1049549027 - - cytochrome P450, putative [Ricinus communis]
5 Hb_000321_170 0.1058174883 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Jatropha curcas]
6 Hb_000441_130 0.1083740114 - - PREDICTED: homeobox-leucine zipper protein HOX32 [Vitis vinifera]
7 Hb_002818_060 0.1106683923 - - zinc finger protein, putative [Ricinus communis]
8 Hb_000363_390 0.114336265 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
9 Hb_001025_130 0.1198698883 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
10 Hb_008686_010 0.1278147266 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000342_040 0.1297060395 - - pollen specific protein sf21, putative [Ricinus communis]
12 Hb_004117_090 0.1305677747 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 70 [Jatropha curcas]
13 Hb_003992_280 0.1322577439 - - PREDICTED: uncharacterized protein LOC105117987 [Populus euphratica]
14 Hb_000003_750 0.1342189545 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
15 Hb_000300_190 0.1352245484 - - PREDICTED: uncharacterized protein LOC105632566 [Jatropha curcas]
16 Hb_005890_020 0.1352829714 - - putative plant disease resistance family protein [Populus trichocarpa]
17 Hb_000373_020 0.1355011595 - - PREDICTED: beta-adaptin-like protein A [Jatropha curcas]
18 Hb_097292_010 0.1361325677 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
19 Hb_002267_060 0.1362248435 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
20 Hb_033720_030 0.1363067479 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000022_080 Hb_000022_080 Hb_005496_040 Hb_005496_040 Hb_000022_080--Hb_005496_040 Hb_002045_210 Hb_002045_210 Hb_000022_080--Hb_002045_210 Hb_004195_070 Hb_004195_070 Hb_000022_080--Hb_004195_070 Hb_000321_170 Hb_000321_170 Hb_000022_080--Hb_000321_170 Hb_000441_130 Hb_000441_130 Hb_000022_080--Hb_000441_130 Hb_002818_060 Hb_002818_060 Hb_000022_080--Hb_002818_060 Hb_000342_040 Hb_000342_040 Hb_005496_040--Hb_000342_040 Hb_003750_120 Hb_003750_120 Hb_005496_040--Hb_003750_120 Hb_008686_010 Hb_008686_010 Hb_005496_040--Hb_008686_010 Hb_000032_420 Hb_000032_420 Hb_005496_040--Hb_000032_420 Hb_004117_090 Hb_004117_090 Hb_005496_040--Hb_004117_090 Hb_000003_750 Hb_000003_750 Hb_005496_040--Hb_000003_750 Hb_001056_040 Hb_001056_040 Hb_002045_210--Hb_001056_040 Hb_002045_210--Hb_005496_040 Hb_002045_210--Hb_000321_170 Hb_002045_210--Hb_000342_040 Hb_002045_210--Hb_003750_120 Hb_162472_010 Hb_162472_010 Hb_004195_070--Hb_162472_010 Hb_033720_030 Hb_033720_030 Hb_004195_070--Hb_033720_030 Hb_001025_130 Hb_001025_130 Hb_004195_070--Hb_001025_130 Hb_026218_010 Hb_026218_010 Hb_004195_070--Hb_026218_010 Hb_006483_070 Hb_006483_070 Hb_004195_070--Hb_006483_070 Hb_002267_060 Hb_002267_060 Hb_000321_170--Hb_002267_060 Hb_000321_170--Hb_005496_040 Hb_000120_930 Hb_000120_930 Hb_000321_170--Hb_000120_930 Hb_005890_020 Hb_005890_020 Hb_000321_170--Hb_005890_020 Hb_000996_070 Hb_000996_070 Hb_000441_130--Hb_000996_070 Hb_000441_130--Hb_000032_420 Hb_017383_010 Hb_017383_010 Hb_000441_130--Hb_017383_010 Hb_010449_010 Hb_010449_010 Hb_000441_130--Hb_010449_010 Hb_004137_110 Hb_004137_110 Hb_000441_130--Hb_004137_110 Hb_000077_280 Hb_000077_280 Hb_000441_130--Hb_000077_280 Hb_001349_050 Hb_001349_050 Hb_002818_060--Hb_001349_050 Hb_001623_250 Hb_001623_250 Hb_002818_060--Hb_001623_250 Hb_002203_010 Hb_002203_010 Hb_002818_060--Hb_002203_010 Hb_000359_100 Hb_000359_100 Hb_002818_060--Hb_000359_100 Hb_002894_060 Hb_002894_060 Hb_002818_060--Hb_002894_060 Hb_000363_390 Hb_000363_390 Hb_002818_060--Hb_000363_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0549931 0.212954 1.81662 2.19341 0.0365443 0.0132815
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0172417 0 0.0258764 0.0430941 0.490509

CAGE analysis