Hb_008686_010

Information

Type -
Description -
Location Contig8686: 14560-19459
Sequence    

Annotation

kegg
ID rcu:RCOM_1387470
description hypothetical protein
nr
ID XP_002530648.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID B9SXC9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1387470 PE=4 SV=1
Gene Ontology
ID GO:0005768
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008686_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_169893_010 0.0721770999 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
3 Hb_005496_040 0.081963781 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]
4 Hb_001195_550 0.089896645 - - PREDICTED: deSI-like protein At4g17486 isoform X1 [Jatropha curcas]
5 Hb_070498_010 0.0913322999 - - receptor kinase, putative [Ricinus communis]
6 Hb_000003_750 0.0986595972 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
7 Hb_143629_120 0.1002758764 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
8 Hb_003750_120 0.1042143059 - - PREDICTED: uncharacterized protein LOC105112992 [Populus euphratica]
9 Hb_128196_010 0.1045559792 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002301_400 0.1100331416 - - structural constituent of cell wall, putative [Ricinus communis]
11 Hb_000032_420 0.1181446221 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
12 Hb_001159_090 0.1220408233 - - PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]
13 Hb_047659_010 0.1237566832 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000321_170 0.1257312555 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Jatropha curcas]
15 Hb_001157_050 0.1259252371 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
16 Hb_005568_020 0.1264741867 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-7 isoform X1 [Jatropha curcas]
17 Hb_000022_080 0.1278147266 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
18 Hb_001186_100 0.1280357328 - - PREDICTED: uncharacterized protein LOC105640806 isoform X1 [Jatropha curcas]
19 Hb_005890_020 0.1286691896 - - putative plant disease resistance family protein [Populus trichocarpa]
20 Hb_004117_090 0.1288719248 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 70 [Jatropha curcas]

Gene co-expression network

sample Hb_008686_010 Hb_008686_010 Hb_169893_010 Hb_169893_010 Hb_008686_010--Hb_169893_010 Hb_005496_040 Hb_005496_040 Hb_008686_010--Hb_005496_040 Hb_001195_550 Hb_001195_550 Hb_008686_010--Hb_001195_550 Hb_070498_010 Hb_070498_010 Hb_008686_010--Hb_070498_010 Hb_000003_750 Hb_000003_750 Hb_008686_010--Hb_000003_750 Hb_143629_120 Hb_143629_120 Hb_008686_010--Hb_143629_120 Hb_169893_010--Hb_001195_550 Hb_169893_010--Hb_070498_010 Hb_002301_400 Hb_002301_400 Hb_169893_010--Hb_002301_400 Hb_003750_120 Hb_003750_120 Hb_169893_010--Hb_003750_120 Hb_128196_010 Hb_128196_010 Hb_169893_010--Hb_128196_010 Hb_000342_040 Hb_000342_040 Hb_005496_040--Hb_000342_040 Hb_005496_040--Hb_003750_120 Hb_000032_420 Hb_000032_420 Hb_005496_040--Hb_000032_420 Hb_004117_090 Hb_004117_090 Hb_005496_040--Hb_004117_090 Hb_005496_040--Hb_000003_750 Hb_001195_550--Hb_070498_010 Hb_001195_550--Hb_002301_400 Hb_001159_090 Hb_001159_090 Hb_001195_550--Hb_001159_090 Hb_002639_050 Hb_002639_050 Hb_001195_550--Hb_002639_050 Hb_070498_010--Hb_128196_010 Hb_070498_010--Hb_002301_400 Hb_000996_030 Hb_000996_030 Hb_070498_010--Hb_000996_030 Hb_012404_020 Hb_012404_020 Hb_070498_010--Hb_012404_020 Hb_011918_070 Hb_011918_070 Hb_070498_010--Hb_011918_070 Hb_070498_010--Hb_000003_750 Hb_000003_750--Hb_011918_070 Hb_001157_050 Hb_001157_050 Hb_000003_750--Hb_001157_050 Hb_000003_750--Hb_003750_120 Hb_015048_020 Hb_015048_020 Hb_000003_750--Hb_015048_020 Hb_143629_120--Hb_001195_550 Hb_000599_330 Hb_000599_330 Hb_143629_120--Hb_000599_330 Hb_015941_010 Hb_015941_010 Hb_143629_120--Hb_015941_010 Hb_143629_120--Hb_169893_010 Hb_012286_060 Hb_012286_060 Hb_143629_120--Hb_012286_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0264131 0.502672 2.84808 3.38422 0.0435026 0.15098
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0199953 0.0314671 0.0299186 0.231375 1.13396

CAGE analysis