Hb_000032_420

Information

Type -
Description -
Location Contig32: 321861-324204
Sequence    

Annotation

kegg
ID rcu:RCOM_1692270
description triacylglycerol lipase, putative
nr
ID XP_012086704.1
description PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
swissprot
ID Q680C0
description GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=1
trembl
ID A0A067JMT8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20442 PE=4 SV=1
Gene Ontology
ID GO:0006629
description gdsl esterase lipase at4g10955

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33741: 321880-324029
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_420 0.0 - - PREDICTED: GDSL esterase/lipase At4g10955 [Jatropha curcas]
2 Hb_010449_010 0.0546408186 - - l-ascorbate oxidase, putative [Ricinus communis]
3 Hb_017383_010 0.0559078478 - - PREDICTED: uncharacterized protein LOC105628176 [Jatropha curcas]
4 Hb_001544_090 0.0752987799 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
5 Hb_000996_070 0.0773763082 - - unnamed protein product [Vitis vinifera]
6 Hb_015048_020 0.0779427312 - - PREDICTED: myb-like protein D [Jatropha curcas]
7 Hb_000441_130 0.0789738893 - - PREDICTED: homeobox-leucine zipper protein HOX32 [Vitis vinifera]
8 Hb_001794_040 0.0796210323 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
9 Hb_000878_050 0.0805542244 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
10 Hb_000680_170 0.0806785989 - - hypothetical protein JCGZ_24789 [Jatropha curcas]
11 Hb_005496_040 0.0832574876 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]
12 Hb_020738_010 0.0847489097 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
13 Hb_000077_280 0.085214525 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_005976_110 0.0876079118 - - PREDICTED: uncharacterized protein LOC105639708 [Jatropha curcas]
15 Hb_000003_750 0.0895708837 - - PREDICTED: lysM domain receptor-like kinase 3 [Jatropha curcas]
16 Hb_001157_050 0.0895794052 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
17 Hb_001117_050 0.0914951688 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
18 Hb_000103_220 0.0918501599 - - PREDICTED: uncharacterized protein LOC105632036 [Jatropha curcas]
19 Hb_098315_060 0.092702098 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
20 Hb_017434_010 0.0936901504 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]

Gene co-expression network

sample Hb_000032_420 Hb_000032_420 Hb_010449_010 Hb_010449_010 Hb_000032_420--Hb_010449_010 Hb_017383_010 Hb_017383_010 Hb_000032_420--Hb_017383_010 Hb_001544_090 Hb_001544_090 Hb_000032_420--Hb_001544_090 Hb_000996_070 Hb_000996_070 Hb_000032_420--Hb_000996_070 Hb_015048_020 Hb_015048_020 Hb_000032_420--Hb_015048_020 Hb_000441_130 Hb_000441_130 Hb_000032_420--Hb_000441_130 Hb_010449_010--Hb_017383_010 Hb_017434_010 Hb_017434_010 Hb_010449_010--Hb_017434_010 Hb_000103_220 Hb_000103_220 Hb_010449_010--Hb_000103_220 Hb_010449_010--Hb_000996_070 Hb_098315_060 Hb_098315_060 Hb_010449_010--Hb_098315_060 Hb_017383_010--Hb_000103_220 Hb_000077_280 Hb_000077_280 Hb_017383_010--Hb_000077_280 Hb_017383_010--Hb_017434_010 Hb_001794_040 Hb_001794_040 Hb_017383_010--Hb_001794_040 Hb_005976_110 Hb_005976_110 Hb_001544_090--Hb_005976_110 Hb_001080_190 Hb_001080_190 Hb_001544_090--Hb_001080_190 Hb_001674_010 Hb_001674_010 Hb_001544_090--Hb_001674_010 Hb_001095_020 Hb_001095_020 Hb_001544_090--Hb_001095_020 Hb_007617_010 Hb_007617_010 Hb_001544_090--Hb_007617_010 Hb_000996_070--Hb_000441_130 Hb_001157_050 Hb_001157_050 Hb_000996_070--Hb_001157_050 Hb_006196_030 Hb_006196_030 Hb_000996_070--Hb_006196_030 Hb_000996_070--Hb_001794_040 Hb_015048_020--Hb_001157_050 Hb_015048_020--Hb_010449_010 Hb_001117_050 Hb_001117_050 Hb_015048_020--Hb_001117_050 Hb_000112_080 Hb_000112_080 Hb_015048_020--Hb_000112_080 Hb_000003_750 Hb_000003_750 Hb_015048_020--Hb_000003_750 Hb_000441_130--Hb_017383_010 Hb_000441_130--Hb_010449_010 Hb_004137_110 Hb_004137_110 Hb_000441_130--Hb_004137_110 Hb_000441_130--Hb_000077_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.329374 5.20073 27.6039 32.6928 0.117984 0.058243
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0349886 0.0550498 0.103014 1.54037 15.8238

CAGE analysis