Hb_000134_130

Information

Type -
Description -
Location Contig134: 92596-95164
Sequence    

Annotation

kegg
ID rcu:RCOM_1527750
description hypothetical protein
nr
ID XP_012065518.1
description PREDICTED: uncharacterized protein LOC105628670 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LGW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16721 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09606: 92473-95129
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000134_130 0.0 - - PREDICTED: uncharacterized protein LOC105628670 [Jatropha curcas]
2 Hb_152910_050 0.047040894 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
3 Hb_098315_060 0.0481758634 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
4 Hb_040852_010 0.0489969941 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003894_110 0.0499196416 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
6 Hb_001021_120 0.0595573245 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-4 [Jatropha curcas]
7 Hb_003376_020 0.0659169252 - - PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Jatropha curcas]
8 Hb_019516_010 0.0700992446 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like isoform X2 [Populus euphratica]
9 Hb_001007_020 0.0717323069 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
10 Hb_031321_020 0.0729625438 - - hypothetical protein POPTR_0003s15520g [Populus trichocarpa]
11 Hb_000320_010 0.0753121859 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000103_220 0.0773865886 - - PREDICTED: uncharacterized protein LOC105632036 [Jatropha curcas]
13 Hb_002894_060 0.0780176398 - - respiratory burst oxidase D [Manihot esculenta]
14 Hb_017434_010 0.0782478744 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
15 Hb_000418_110 0.0784041882 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
16 Hb_000009_270 0.0784387617 - - Calmodulin, putative [Ricinus communis]
17 Hb_031022_030 0.0865776726 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7-like [Jatropha curcas]
18 Hb_007221_020 0.0869615093 - - FAD-binding domain-containing family protein [Populus trichocarpa]
19 Hb_000331_170 0.0909148901 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
20 Hb_004202_020 0.0959541697 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000134_130 Hb_000134_130 Hb_152910_050 Hb_152910_050 Hb_000134_130--Hb_152910_050 Hb_098315_060 Hb_098315_060 Hb_000134_130--Hb_098315_060 Hb_040852_010 Hb_040852_010 Hb_000134_130--Hb_040852_010 Hb_003894_110 Hb_003894_110 Hb_000134_130--Hb_003894_110 Hb_001021_120 Hb_001021_120 Hb_000134_130--Hb_001021_120 Hb_003376_020 Hb_003376_020 Hb_000134_130--Hb_003376_020 Hb_152910_050--Hb_040852_010 Hb_152910_050--Hb_098315_060 Hb_152910_050--Hb_003894_110 Hb_017434_010 Hb_017434_010 Hb_152910_050--Hb_017434_010 Hb_000103_220 Hb_000103_220 Hb_152910_050--Hb_000103_220 Hb_098315_060--Hb_040852_010 Hb_098315_060--Hb_003894_110 Hb_098315_060--Hb_017434_010 Hb_098315_060--Hb_000103_220 Hb_040852_010--Hb_003894_110 Hb_040852_010--Hb_003376_020 Hb_004202_020 Hb_004202_020 Hb_040852_010--Hb_004202_020 Hb_003894_110--Hb_003376_020 Hb_003894_110--Hb_004202_020 Hb_000009_270 Hb_000009_270 Hb_001021_120--Hb_000009_270 Hb_031321_020 Hb_031321_020 Hb_001021_120--Hb_031321_020 Hb_007922_030 Hb_007922_030 Hb_001021_120--Hb_007922_030 Hb_001021_120--Hb_152910_050 Hb_001021_120--Hb_098315_060 Hb_003376_020--Hb_152910_050 Hb_003376_020--Hb_098315_060 Hb_003376_020--Hb_000103_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0461512 19.5268 391.41 408.531 0.0951405 0.200736
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.259388 0.102032 0 6.74341 172.766

CAGE analysis