Hb_001021_120

Information

Type transcription factor
Description TF Family: NF-YB
Location Contig1021: 119102-119620
Sequence    

Annotation

kegg
ID vvi:104879763
description nuclear transcription factor Y subunit B-5
nr
ID XP_012082708.1
description PREDICTED: nuclear transcription factor Y subunit B-4 [Jatropha curcas]
swissprot
ID O82248
description Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2 SV=1
trembl
ID A0A067K777
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13881 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nuclear transcription factor y subunit b-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001021_120 0.0 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-4 [Jatropha curcas]
2 Hb_000009_270 0.0401361737 - - Calmodulin, putative [Ricinus communis]
3 Hb_031321_020 0.0577439504 - - hypothetical protein POPTR_0003s15520g [Populus trichocarpa]
4 Hb_000134_130 0.0595573245 - - PREDICTED: uncharacterized protein LOC105628670 [Jatropha curcas]
5 Hb_007922_030 0.0606502509 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]
6 Hb_152910_050 0.0627283136 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
7 Hb_098315_060 0.0636879061 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 7-like [Jatropha curcas]
8 Hb_017434_010 0.0691598621 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
9 Hb_007221_020 0.0702985606 - - FAD-binding domain-containing family protein [Populus trichocarpa]
10 Hb_003894_110 0.070569118 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
11 Hb_002609_120 0.0708731236 - - hypothetical protein POPTR_0001s25660g [Populus trichocarpa]
12 Hb_031022_030 0.0713785227 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7-like [Jatropha curcas]
13 Hb_009486_050 0.0717581497 - - PREDICTED: cyclin-U4-1 [Jatropha curcas]
14 Hb_000483_450 0.0754305516 - - PREDICTED: anthranilate N-benzoyltransferase protein 1 [Jatropha curcas]
15 Hb_019516_010 0.0794158971 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like isoform X2 [Populus euphratica]
16 Hb_040852_010 0.0798421491 - - conserved hypothetical protein [Ricinus communis]
17 Hb_032920_020 0.0808930603 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
18 Hb_003376_020 0.0819032499 - - PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_001638_200 0.0843123071 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 43 [Jatropha curcas]
20 Hb_000003_380 0.0881887643 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001021_120 Hb_001021_120 Hb_000009_270 Hb_000009_270 Hb_001021_120--Hb_000009_270 Hb_031321_020 Hb_031321_020 Hb_001021_120--Hb_031321_020 Hb_000134_130 Hb_000134_130 Hb_001021_120--Hb_000134_130 Hb_007922_030 Hb_007922_030 Hb_001021_120--Hb_007922_030 Hb_152910_050 Hb_152910_050 Hb_001021_120--Hb_152910_050 Hb_098315_060 Hb_098315_060 Hb_001021_120--Hb_098315_060 Hb_002609_120 Hb_002609_120 Hb_000009_270--Hb_002609_120 Hb_032920_020 Hb_032920_020 Hb_000009_270--Hb_032920_020 Hb_017434_010 Hb_017434_010 Hb_000009_270--Hb_017434_010 Hb_000009_270--Hb_098315_060 Hb_001674_010 Hb_001674_010 Hb_000009_270--Hb_001674_010 Hb_007221_020 Hb_007221_020 Hb_031321_020--Hb_007221_020 Hb_031022_030 Hb_031022_030 Hb_031321_020--Hb_031022_030 Hb_031321_020--Hb_007922_030 Hb_031321_020--Hb_000134_130 Hb_000331_170 Hb_000331_170 Hb_031321_020--Hb_000331_170 Hb_000134_130--Hb_152910_050 Hb_000134_130--Hb_098315_060 Hb_040852_010 Hb_040852_010 Hb_000134_130--Hb_040852_010 Hb_003894_110 Hb_003894_110 Hb_000134_130--Hb_003894_110 Hb_003376_020 Hb_003376_020 Hb_000134_130--Hb_003376_020 Hb_007922_030--Hb_007221_020 Hb_008021_060 Hb_008021_060 Hb_007922_030--Hb_008021_060 Hb_001652_100 Hb_001652_100 Hb_007922_030--Hb_001652_100 Hb_000058_180 Hb_000058_180 Hb_007922_030--Hb_000058_180 Hb_152910_050--Hb_040852_010 Hb_152910_050--Hb_098315_060 Hb_152910_050--Hb_003894_110 Hb_152910_050--Hb_017434_010 Hb_000103_220 Hb_000103_220 Hb_152910_050--Hb_000103_220 Hb_098315_060--Hb_040852_010 Hb_098315_060--Hb_003894_110 Hb_098315_060--Hb_017434_010 Hb_098315_060--Hb_000103_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.06945 51.569 50.6949 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.11032 30.3006

CAGE analysis