Hb_010607_010

Information

Type -
Description -
Location Contig10607: 4958-22048
Sequence    

Annotation

kegg
ID pop:POPTR_0017s06310g
description hypothetical protein
nr
ID KDP42826.1
description hypothetical protein JCGZ_23768 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010607_010 0.0 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
2 Hb_003654_020 0.1363996816 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
3 Hb_000186_180 0.1415609641 - - PREDICTED: uncharacterized protein LOC105649287 [Jatropha curcas]
4 Hb_000167_100 0.154447129 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_003683_070 0.1638288538 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
6 Hb_006243_010 0.1639554875 - - PREDICTED: cell wall protein IFF6 [Populus euphratica]
7 Hb_000320_390 0.1676883559 transcription factor TF Family: MYB-related PREDICTED: transcription factor CPC-like [Jatropha curcas]
8 Hb_002818_160 0.17092272 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
9 Hb_000031_320 0.1712238542 - - unnamed protein product [Vitis vinifera]
10 Hb_000732_300 0.1721712576 - - PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]
11 Hb_005337_140 0.1724245104 - - PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 1-like [Jatropha curcas]
12 Hb_000107_090 0.1762503785 - - PREDICTED: kinesin KP1 [Jatropha curcas]
13 Hb_002284_160 0.1765048567 - - glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus communis]
14 Hb_004126_050 0.1766236252 - - PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
15 Hb_000594_150 0.1775174277 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like isoform X1 [Nelumbo nucifera]
16 Hb_000815_090 0.1799410758 - - PREDICTED: uncharacterized protein LOC105630464 isoform X1 [Jatropha curcas]
17 Hb_000072_240 0.1804238406 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
18 Hb_019863_050 0.1822396127 - - PREDICTED: uncharacterized protein LOC103343426 [Prunus mume]
19 Hb_003209_150 0.1824514125 - - CLE9, putative [Ricinus communis]
20 Hb_010180_050 0.1827633158 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_010607_010 Hb_010607_010 Hb_003654_020 Hb_003654_020 Hb_010607_010--Hb_003654_020 Hb_000186_180 Hb_000186_180 Hb_010607_010--Hb_000186_180 Hb_000167_100 Hb_000167_100 Hb_010607_010--Hb_000167_100 Hb_003683_070 Hb_003683_070 Hb_010607_010--Hb_003683_070 Hb_006243_010 Hb_006243_010 Hb_010607_010--Hb_006243_010 Hb_000320_390 Hb_000320_390 Hb_010607_010--Hb_000320_390 Hb_003654_020--Hb_000186_180 Hb_003209_150 Hb_003209_150 Hb_003654_020--Hb_003209_150 Hb_000732_300 Hb_000732_300 Hb_003654_020--Hb_000732_300 Hb_000031_320 Hb_000031_320 Hb_003654_020--Hb_000031_320 Hb_002307_120 Hb_002307_120 Hb_003654_020--Hb_002307_120 Hb_002818_160 Hb_002818_160 Hb_003654_020--Hb_002818_160 Hb_000186_180--Hb_002818_160 Hb_000186_180--Hb_000031_320 Hb_000186_180--Hb_000167_100 Hb_000186_180--Hb_002307_120 Hb_001677_170 Hb_001677_170 Hb_000186_180--Hb_001677_170 Hb_000167_100--Hb_000031_320 Hb_001777_030 Hb_001777_030 Hb_000167_100--Hb_001777_030 Hb_019863_050 Hb_019863_050 Hb_000167_100--Hb_019863_050 Hb_000167_100--Hb_003654_020 Hb_000815_090 Hb_000815_090 Hb_000167_100--Hb_000815_090 Hb_000879_240 Hb_000879_240 Hb_003683_070--Hb_000879_240 Hb_003683_070--Hb_003654_020 Hb_001771_060 Hb_001771_060 Hb_003683_070--Hb_001771_060 Hb_003683_070--Hb_000815_090 Hb_003683_070--Hb_000186_180 Hb_004126_050 Hb_004126_050 Hb_006243_010--Hb_004126_050 Hb_000780_160 Hb_000780_160 Hb_006243_010--Hb_000780_160 Hb_005337_140 Hb_005337_140 Hb_006243_010--Hb_005337_140 Hb_006243_010--Hb_000186_180 Hb_000061_440 Hb_000061_440 Hb_006243_010--Hb_000061_440 Hb_006243_010--Hb_019863_050 Hb_001014_020 Hb_001014_020 Hb_000320_390--Hb_001014_020 Hb_013394_120 Hb_013394_120 Hb_000320_390--Hb_013394_120 Hb_010222_060 Hb_010222_060 Hb_000320_390--Hb_010222_060 Hb_000272_030 Hb_000272_030 Hb_000320_390--Hb_000272_030 Hb_000173_270 Hb_000173_270 Hb_000320_390--Hb_000173_270 Hb_000260_410 Hb_000260_410 Hb_000320_390--Hb_000260_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.010628 0.561919 0.625785 0.395953 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0584354 0.0306539 0 0 0.910267

CAGE analysis