Hb_001016_140

Information

Type -
Description -
Location Contig1016: 170986-178258
Sequence    

Annotation

kegg
ID vvi:100241859
description uncharacterized LOC100241859
nr
ID XP_012088498.1
description PREDICTED: uncharacterized protein LOC105647117 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JME2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25381 PE=4 SV=1
Gene Ontology
ID GO:0006109
description PREDICTED: uncharacterized protein LOC105647117

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00769: 171682-173198
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001016_140 0.0 - - PREDICTED: uncharacterized protein LOC105647117 [Jatropha curcas]
2 Hb_184008_010 0.1851450854 - - putative LRR receptor-like serine/threonine-protein kinase [Morus notabilis]
3 Hb_003751_100 0.2087277246 - - Amino acid permease 2 [Glycine soja]
4 Hb_006472_070 0.213809436 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
5 Hb_006545_020 0.2208674975 - - multicopper oxidase, putative [Ricinus communis]
6 Hb_000272_110 0.2248262278 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
7 Hb_052434_010 0.229391061 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
8 Hb_004837_220 0.2353347661 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
9 Hb_000094_250 0.2365452548 - - PREDICTED: uncharacterized protein LOC105633774 isoform X3 [Jatropha curcas]
10 Hb_001318_110 0.2369018956 - - PREDICTED: uncharacterized protein LOC105642677 [Jatropha curcas]
11 Hb_000109_130 0.2385150626 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]
12 Hb_164162_010 0.2449656781 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
13 Hb_001318_150 0.2457609738 - - PREDICTED: shaggy-related protein kinase alpha-like [Jatropha curcas]
14 Hb_002641_050 0.2469092302 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 48 [Jatropha curcas]
15 Hb_047442_010 0.2514693267 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]
16 Hb_002477_100 0.2523759656 - - PREDICTED: protein Brevis radix-like 2 [Jatropha curcas]
17 Hb_000111_390 0.2542569006 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
18 Hb_065755_020 0.2558021832 - - choline monooxygenase, putative [Ricinus communis]
19 Hb_001085_300 0.2569856066 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
20 Hb_000820_160 0.2573585194 - - -

Gene co-expression network

sample Hb_001016_140 Hb_001016_140 Hb_184008_010 Hb_184008_010 Hb_001016_140--Hb_184008_010 Hb_003751_100 Hb_003751_100 Hb_001016_140--Hb_003751_100 Hb_006472_070 Hb_006472_070 Hb_001016_140--Hb_006472_070 Hb_006545_020 Hb_006545_020 Hb_001016_140--Hb_006545_020 Hb_000272_110 Hb_000272_110 Hb_001016_140--Hb_000272_110 Hb_052434_010 Hb_052434_010 Hb_001016_140--Hb_052434_010 Hb_013938_010 Hb_013938_010 Hb_184008_010--Hb_013938_010 Hb_002641_050 Hb_002641_050 Hb_184008_010--Hb_002641_050 Hb_000001_010 Hb_000001_010 Hb_184008_010--Hb_000001_010 Hb_184008_010--Hb_052434_010 Hb_001318_110 Hb_001318_110 Hb_184008_010--Hb_001318_110 Hb_000008_430 Hb_000008_430 Hb_184008_010--Hb_000008_430 Hb_007163_080 Hb_007163_080 Hb_003751_100--Hb_007163_080 Hb_005375_060 Hb_005375_060 Hb_003751_100--Hb_005375_060 Hb_003751_050 Hb_003751_050 Hb_003751_100--Hb_003751_050 Hb_002045_260 Hb_002045_260 Hb_003751_100--Hb_002045_260 Hb_011622_010 Hb_011622_010 Hb_003751_100--Hb_011622_010 Hb_002374_360 Hb_002374_360 Hb_003751_100--Hb_002374_360 Hb_004193_010 Hb_004193_010 Hb_006472_070--Hb_004193_010 Hb_000010_300 Hb_000010_300 Hb_006472_070--Hb_000010_300 Hb_006472_080 Hb_006472_080 Hb_006472_070--Hb_006472_080 Hb_001085_150 Hb_001085_150 Hb_006472_070--Hb_001085_150 Hb_000320_260 Hb_000320_260 Hb_006472_070--Hb_000320_260 Hb_000109_130 Hb_000109_130 Hb_006545_020--Hb_000109_130 Hb_002897_100 Hb_002897_100 Hb_006545_020--Hb_002897_100 Hb_000185_230 Hb_000185_230 Hb_006545_020--Hb_000185_230 Hb_006545_020--Hb_004193_010 Hb_001059_090 Hb_001059_090 Hb_006545_020--Hb_001059_090 Hb_006545_020--Hb_000272_110 Hb_001085_300 Hb_001085_300 Hb_000272_110--Hb_001085_300 Hb_007007_080 Hb_007007_080 Hb_000272_110--Hb_007007_080 Hb_001318_150 Hb_001318_150 Hb_000272_110--Hb_001318_150 Hb_001246_160 Hb_001246_160 Hb_000272_110--Hb_001246_160 Hb_001898_130 Hb_001898_130 Hb_000272_110--Hb_001898_130 Hb_002876_070 Hb_002876_070 Hb_000272_110--Hb_002876_070 Hb_003529_230 Hb_003529_230 Hb_052434_010--Hb_003529_230 Hb_005814_010 Hb_005814_010 Hb_052434_010--Hb_005814_010 Hb_025236_020 Hb_025236_020 Hb_052434_010--Hb_025236_020 Hb_000359_260 Hb_000359_260 Hb_052434_010--Hb_000359_260 Hb_052434_010--Hb_000001_010 Hb_002107_110 Hb_002107_110 Hb_052434_010--Hb_002107_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.312307 1.6218 2.11219 0.584003 0.122019 0.0918923
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.51409 0.891287 0.0951499

CAGE analysis