Hb_002876_070

Information

Type transcription factor
Description TF Family: WRKY
Location Contig2876: 47740-50515
Sequence    

Annotation

kegg
ID tcc:TCM_042240
description WRKY DNA-binding protein 33 isoform 1
nr
ID XP_012080808.1
description PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
swissprot
ID Q8S8P5
description Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2
trembl
ID M9TGB8
description Uncharacterized protein OS=Jatropha curcas GN=WRKY07 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 33

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002876_070 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
2 Hb_004586_130 0.1148872976 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003207_100 0.1152283968 transcription factor TF Family: TCP PREDICTED: transcription factor TCP9-like [Jatropha curcas]
4 Hb_000272_110 0.1259989552 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
5 Hb_011930_120 0.1300845208 - - PREDICTED: uncharacterized protein LOC105649794 isoform X1 [Jatropha curcas]
6 Hb_008020_020 0.1329838828 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Jatropha curcas]
7 Hb_001246_160 0.1357872255 - - PREDICTED: dynamin-related protein 1E isoform X2 [Jatropha curcas]
8 Hb_007007_080 0.1373790907 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000776_050 0.1389316994 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
10 Hb_000345_500 0.1410940607 - - PREDICTED: peroxisomal adenine nucleotide carrier 1 [Jatropha curcas]
11 Hb_000283_100 0.1411840395 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Jatropha curcas]
12 Hb_000805_040 0.1414475023 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
13 Hb_000069_330 0.1424973257 - - protein with unknown function [Ricinus communis]
14 Hb_002151_130 0.1428066643 - - 12-oxophytodienoate reductase [Hevea brasiliensis]
15 Hb_000003_240 0.1472988332 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001579_070 0.1476786119 - - PREDICTED: uncharacterized protein LOC105644596 [Jatropha curcas]
17 Hb_001989_060 0.1490051401 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105634562 isoform X2 [Jatropha curcas]
18 Hb_000038_040 0.1500923875 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
19 Hb_000532_030 0.1508461396 - - PREDICTED: oxalate--CoA ligase-like [Jatropha curcas]
20 Hb_031108_010 0.150987279 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]

Gene co-expression network

sample Hb_002876_070 Hb_002876_070 Hb_004586_130 Hb_004586_130 Hb_002876_070--Hb_004586_130 Hb_003207_100 Hb_003207_100 Hb_002876_070--Hb_003207_100 Hb_000272_110 Hb_000272_110 Hb_002876_070--Hb_000272_110 Hb_011930_120 Hb_011930_120 Hb_002876_070--Hb_011930_120 Hb_008020_020 Hb_008020_020 Hb_002876_070--Hb_008020_020 Hb_001246_160 Hb_001246_160 Hb_002876_070--Hb_001246_160 Hb_000283_100 Hb_000283_100 Hb_004586_130--Hb_000283_100 Hb_002151_130 Hb_002151_130 Hb_004586_130--Hb_002151_130 Hb_010126_030 Hb_010126_030 Hb_004586_130--Hb_010126_030 Hb_000221_230 Hb_000221_230 Hb_004586_130--Hb_000221_230 Hb_001989_060 Hb_001989_060 Hb_004586_130--Hb_001989_060 Hb_006846_020 Hb_006846_020 Hb_003207_100--Hb_006846_020 Hb_007007_080 Hb_007007_080 Hb_003207_100--Hb_007007_080 Hb_003207_100--Hb_000272_110 Hb_000038_040 Hb_000038_040 Hb_003207_100--Hb_000038_040 Hb_000069_330 Hb_000069_330 Hb_003207_100--Hb_000069_330 Hb_001085_300 Hb_001085_300 Hb_000272_110--Hb_001085_300 Hb_000272_110--Hb_007007_080 Hb_001318_150 Hb_001318_150 Hb_000272_110--Hb_001318_150 Hb_000272_110--Hb_001246_160 Hb_001898_130 Hb_001898_130 Hb_000272_110--Hb_001898_130 Hb_001579_070 Hb_001579_070 Hb_011930_120--Hb_001579_070 Hb_000680_180 Hb_000680_180 Hb_011930_120--Hb_000680_180 Hb_000086_620 Hb_000086_620 Hb_011930_120--Hb_000086_620 Hb_011930_120--Hb_001989_060 Hb_000805_040 Hb_000805_040 Hb_011930_120--Hb_000805_040 Hb_002498_250 Hb_002498_250 Hb_011930_120--Hb_002498_250 Hb_008020_020--Hb_000221_230 Hb_090782_010 Hb_090782_010 Hb_008020_020--Hb_090782_010 Hb_015026_040 Hb_015026_040 Hb_008020_020--Hb_015026_040 Hb_047442_010 Hb_047442_010 Hb_008020_020--Hb_047442_010 Hb_008020_020--Hb_004586_130 Hb_000749_070 Hb_000749_070 Hb_001246_160--Hb_000749_070 Hb_000009_200 Hb_000009_200 Hb_001246_160--Hb_000009_200 Hb_005394_010 Hb_005394_010 Hb_001246_160--Hb_005394_010 Hb_002122_030 Hb_002122_030 Hb_001246_160--Hb_002122_030 Hb_018790_050 Hb_018790_050 Hb_001246_160--Hb_018790_050 Hb_056196_060 Hb_056196_060 Hb_001246_160--Hb_056196_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.2298 236.122 144.407 56.478 7.15669 8.92526
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.6462 29.8537 19.5378 24.8367 19.4349

CAGE analysis