Hb_090782_010

Information

Type -
Description -
Location Contig90782: 1044-4147
Sequence    

Annotation

kegg
ID rcu:RCOM_1255930
description diacylglycerol kinase, alpha, putative (EC:2.7.1.107)
nr
ID XP_012070671.1
description PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
swissprot
ID Q9C5E5
description Diacylglycerol kinase 5 OS=Arabidopsis thaliana GN=DGK5 PE=2 SV=1
trembl
ID A0A067KS48
description Diacylglycerol kinase OS=Jatropha curcas GN=JCGZ_00714 PE=3 SV=1
Gene Ontology
ID GO:0004143
description diacylglycerol kinase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62084: 1127-1555 , PASA_asmbl_62085: 1787-1982 , PASA_asmbl_62086: 3141-3693
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_090782_010 0.0 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
2 Hb_000454_140 0.09640034 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2a-like [Jatropha curcas]
3 Hb_000163_230 0.1020846646 - - Phytochrome A-associated F-box protein, putative [Ricinus communis]
4 Hb_000045_260 0.1057934899 - - protein with unknown function [Ricinus communis]
5 Hb_008020_020 0.1159496635 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Jatropha curcas]
6 Hb_161901_020 0.1189004776 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Vitis vinifera]
7 Hb_015026_040 0.1189544188 - - PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 [Jatropha curcas]
8 Hb_000421_230 0.1194521756 - - retinal degeneration B beta, putative [Ricinus communis]
9 Hb_005394_010 0.1246892401 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
10 Hb_000084_240 0.1267809416 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
11 Hb_000069_730 0.1285222268 transcription factor TF Family: bZIP PREDICTED: common plant regulatory factor 1-like isoform X1 [Jatropha curcas]
12 Hb_002701_210 0.1310268399 - - Protein COBRA precursor, putative [Ricinus communis]
13 Hb_000445_100 0.1312540293 - - PREDICTED: glutathione S-transferase TCHQD [Jatropha curcas]
14 Hb_005499_010 0.1314839437 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
15 Hb_003581_280 0.1322271338 - - KINASE 2B family protein [Populus trichocarpa]
16 Hb_002107_060 0.1345154576 - - PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]
17 Hb_011631_010 0.1364985448 - - PREDICTED: uncharacterized protein LOC105641795 [Jatropha curcas]
18 Hb_004108_240 0.1366043853 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
19 Hb_001085_300 0.1380917228 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
20 Hb_005941_020 0.1397376611 - - PREDICTED: double-stranded RNA-binding protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_090782_010 Hb_090782_010 Hb_000454_140 Hb_000454_140 Hb_090782_010--Hb_000454_140 Hb_000163_230 Hb_000163_230 Hb_090782_010--Hb_000163_230 Hb_000045_260 Hb_000045_260 Hb_090782_010--Hb_000045_260 Hb_008020_020 Hb_008020_020 Hb_090782_010--Hb_008020_020 Hb_161901_020 Hb_161901_020 Hb_090782_010--Hb_161901_020 Hb_015026_040 Hb_015026_040 Hb_090782_010--Hb_015026_040 Hb_000454_140--Hb_000163_230 Hb_007849_050 Hb_007849_050 Hb_000454_140--Hb_007849_050 Hb_000454_140--Hb_000045_260 Hb_012305_140 Hb_012305_140 Hb_000454_140--Hb_012305_140 Hb_005694_130 Hb_005694_130 Hb_000454_140--Hb_005694_130 Hb_005499_010 Hb_005499_010 Hb_000454_140--Hb_005499_010 Hb_001009_090 Hb_001009_090 Hb_000163_230--Hb_001009_090 Hb_000163_230--Hb_000045_260 Hb_003078_030 Hb_003078_030 Hb_000163_230--Hb_003078_030 Hb_000671_060 Hb_000671_060 Hb_000163_230--Hb_000671_060 Hb_000186_200 Hb_000186_200 Hb_000163_230--Hb_000186_200 Hb_011631_010 Hb_011631_010 Hb_000045_260--Hb_011631_010 Hb_000638_280 Hb_000638_280 Hb_000045_260--Hb_000638_280 Hb_002897_050 Hb_002897_050 Hb_000045_260--Hb_002897_050 Hb_000084_240 Hb_000084_240 Hb_000045_260--Hb_000084_240 Hb_000221_230 Hb_000221_230 Hb_008020_020--Hb_000221_230 Hb_008020_020--Hb_015026_040 Hb_047442_010 Hb_047442_010 Hb_008020_020--Hb_047442_010 Hb_004586_130 Hb_004586_130 Hb_008020_020--Hb_004586_130 Hb_002876_070 Hb_002876_070 Hb_008020_020--Hb_002876_070 Hb_000622_210 Hb_000622_210 Hb_161901_020--Hb_000622_210 Hb_033930_010 Hb_033930_010 Hb_161901_020--Hb_033930_010 Hb_001894_160 Hb_001894_160 Hb_161901_020--Hb_001894_160 Hb_005941_020 Hb_005941_020 Hb_161901_020--Hb_005941_020 Hb_000086_640 Hb_000086_640 Hb_161901_020--Hb_000086_640 Hb_000421_230 Hb_000421_230 Hb_161901_020--Hb_000421_230 Hb_015026_040--Hb_000221_230 Hb_041895_040 Hb_041895_040 Hb_015026_040--Hb_041895_040 Hb_005394_010 Hb_005394_010 Hb_015026_040--Hb_005394_010 Hb_000445_100 Hb_000445_100 Hb_015026_040--Hb_000445_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.826 81.4315 66.1764 27.3293 9.85712 8.22461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.6187 11.0354 5.81677 9.81931 15.9748

CAGE analysis