Hb_011622_010

Information

Type -
Description -
Location Contig11622: 26796-29318
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa010926mg
description hypothetical protein
nr
ID XP_012065468.1
description PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
swissprot
ID Q8S9H7
description Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1
trembl
ID A0A067L5I9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24140 PE=4 SV=1
Gene Ontology
ID GO:0003677
description transcription factor divaricata

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05005: 26941-29557
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011622_010 0.0 - - PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]
2 Hb_006478_140 0.1440763562 - - PREDICTED: vicilin-like antimicrobial peptides 2-2 [Jatropha curcas]
3 Hb_007163_080 0.1493298893 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
4 Hb_005375_060 0.1583612674 - - PREDICTED: probably inactive receptor-like protein kinase At2g46850 [Jatropha curcas]
5 Hb_000604_080 0.1602495537 - - Fgenesh protein [Medicago truncatula]
6 Hb_104641_010 0.1850616421 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
7 Hb_002374_360 0.1863042644 - - hypothetical protein POPTR_0002s08300g [Populus trichocarpa]
8 Hb_001846_030 0.1870239739 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
9 Hb_003751_100 0.2010378383 - - Amino acid permease 2 [Glycine soja]
10 Hb_004725_040 0.203666399 - - -
11 Hb_008948_070 0.2051003585 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
12 Hb_001361_010 0.2054629776 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
13 Hb_000862_060 0.2066960398 - - conserved hypothetical protein [Ricinus communis]
14 Hb_171974_010 0.2074546651 - - aldo-keto reductase, putative [Ricinus communis]
15 Hb_002045_260 0.2088020122 - - calmodulin, putative [Ricinus communis]
16 Hb_011671_200 0.2089092075 - - -
17 Hb_158111_010 0.2093362206 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
18 Hb_001405_250 0.2112982175 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
19 Hb_008115_030 0.2114068706 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
20 Hb_005433_030 0.2120452636 transcription factor TF Family: MYB unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_011622_010 Hb_011622_010 Hb_006478_140 Hb_006478_140 Hb_011622_010--Hb_006478_140 Hb_007163_080 Hb_007163_080 Hb_011622_010--Hb_007163_080 Hb_005375_060 Hb_005375_060 Hb_011622_010--Hb_005375_060 Hb_000604_080 Hb_000604_080 Hb_011622_010--Hb_000604_080 Hb_104641_010 Hb_104641_010 Hb_011622_010--Hb_104641_010 Hb_002374_360 Hb_002374_360 Hb_011622_010--Hb_002374_360 Hb_006478_140--Hb_000604_080 Hb_008948_070 Hb_008948_070 Hb_006478_140--Hb_008948_070 Hb_001846_030 Hb_001846_030 Hb_006478_140--Hb_001846_030 Hb_000953_180 Hb_000953_180 Hb_006478_140--Hb_000953_180 Hb_127372_010 Hb_127372_010 Hb_006478_140--Hb_127372_010 Hb_007163_080--Hb_005375_060 Hb_002151_130 Hb_002151_130 Hb_007163_080--Hb_002151_130 Hb_061908_030 Hb_061908_030 Hb_007163_080--Hb_061908_030 Hb_003751_100 Hb_003751_100 Hb_007163_080--Hb_003751_100 Hb_183192_010 Hb_183192_010 Hb_007163_080--Hb_183192_010 Hb_001581_040 Hb_001581_040 Hb_005375_060--Hb_001581_040 Hb_002045_260 Hb_002045_260 Hb_005375_060--Hb_002045_260 Hb_000462_080 Hb_000462_080 Hb_005375_060--Hb_000462_080 Hb_042098_010 Hb_042098_010 Hb_005375_060--Hb_042098_010 Hb_000340_070 Hb_000340_070 Hb_000604_080--Hb_000340_070 Hb_000604_080--Hb_127372_010 Hb_038601_010 Hb_038601_010 Hb_000604_080--Hb_038601_010 Hb_002435_070 Hb_002435_070 Hb_000604_080--Hb_002435_070 Hb_004725_040 Hb_004725_040 Hb_000604_080--Hb_004725_040 Hb_001361_010 Hb_001361_010 Hb_104641_010--Hb_001361_010 Hb_074672_010 Hb_074672_010 Hb_104641_010--Hb_074672_010 Hb_171974_010 Hb_171974_010 Hb_104641_010--Hb_171974_010 Hb_000433_050 Hb_000433_050 Hb_104641_010--Hb_000433_050 Hb_120011_010 Hb_120011_010 Hb_104641_010--Hb_120011_010 Hb_000025_490 Hb_000025_490 Hb_104641_010--Hb_000025_490 Hb_000862_060 Hb_000862_060 Hb_002374_360--Hb_000862_060 Hb_003751_050 Hb_003751_050 Hb_002374_360--Hb_003751_050 Hb_002157_100 Hb_002157_100 Hb_002374_360--Hb_002157_100 Hb_005433_030 Hb_005433_030 Hb_002374_360--Hb_005433_030 Hb_002374_360--Hb_002045_260 Hb_008080_030 Hb_008080_030 Hb_002374_360--Hb_008080_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.025224 7.83639 12.0198 1.05589 0.236502 0.167067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0578855 0.227609 0.0831632 2.0193 0

CAGE analysis