Hb_001581_040

Information

Type -
Description -
Location Contig1581: 76191-80565
Sequence    

Annotation

kegg
ID rcu:RCOM_1486470
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.30)
nr
ID XP_002515908.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q9FZB1
description Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1
trembl
ID B9RQ89
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1486470 PE=3 SV=1
Gene Ontology
ID GO:0004672
description brassinosteroid insensitive 1-associated receptor kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13922: 76671-77228 , PASA_asmbl_13923: 77426-77696
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001581_040 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_000771_040 0.0774976823 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Jatropha curcas]
3 Hb_000111_240 0.080862466 - - PREDICTED: glutamate receptor 2.8-like [Elaeis guineensis]
4 Hb_042098_010 0.1101017937 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
5 Hb_018633_010 0.1187484178 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_002995_010 0.1312631153 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
7 Hb_002107_110 0.1385982097 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
8 Hb_001776_130 0.1409268989 - - metallothionein [Hevea brasiliensis]
9 Hb_005375_060 0.1413103999 - - PREDICTED: probably inactive receptor-like protein kinase At2g46850 [Jatropha curcas]
10 Hb_001971_030 0.1417697325 - - PREDICTED: exonuclease 1 [Jatropha curcas]
11 Hb_002774_180 0.1440137791 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
12 Hb_009907_020 0.1461984997 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
13 Hb_005834_050 0.1485014068 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
14 Hb_000656_120 0.1488221872 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]
15 Hb_001001_010 0.1489028244 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
16 Hb_001769_120 0.1535218123 - - PREDICTED: tetratricopeptide repeat protein 7A [Jatropha curcas]
17 Hb_000359_260 0.1554158097 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
18 Hb_000454_080 0.1582330489 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
19 Hb_000483_050 0.15901235 - - PREDICTED: vacuolar amino acid transporter 1-like [Jatropha curcas]
20 Hb_004551_010 0.160673637 - - tryptophan synthase beta chain, putative [Ricinus communis]

Gene co-expression network

sample Hb_001581_040 Hb_001581_040 Hb_000771_040 Hb_000771_040 Hb_001581_040--Hb_000771_040 Hb_000111_240 Hb_000111_240 Hb_001581_040--Hb_000111_240 Hb_042098_010 Hb_042098_010 Hb_001581_040--Hb_042098_010 Hb_018633_010 Hb_018633_010 Hb_001581_040--Hb_018633_010 Hb_002995_010 Hb_002995_010 Hb_001581_040--Hb_002995_010 Hb_002107_110 Hb_002107_110 Hb_001581_040--Hb_002107_110 Hb_009907_020 Hb_009907_020 Hb_000771_040--Hb_009907_020 Hb_001971_030 Hb_001971_030 Hb_000771_040--Hb_001971_030 Hb_002774_180 Hb_002774_180 Hb_000771_040--Hb_002774_180 Hb_000771_040--Hb_000111_240 Hb_160653_010 Hb_160653_010 Hb_000771_040--Hb_160653_010 Hb_000111_240--Hb_018633_010 Hb_140000_010 Hb_140000_010 Hb_000111_240--Hb_140000_010 Hb_086614_010 Hb_086614_010 Hb_000111_240--Hb_086614_010 Hb_077694_010 Hb_077694_010 Hb_000111_240--Hb_077694_010 Hb_002045_260 Hb_002045_260 Hb_042098_010--Hb_002045_260 Hb_008080_030 Hb_008080_030 Hb_042098_010--Hb_008080_030 Hb_005628_050 Hb_005628_050 Hb_042098_010--Hb_005628_050 Hb_000001_010 Hb_000001_010 Hb_042098_010--Hb_000001_010 Hb_042098_010--Hb_002774_180 Hb_018633_010--Hb_140000_010 Hb_018633_010--Hb_086614_010 Hb_005599_020 Hb_005599_020 Hb_018633_010--Hb_005599_020 Hb_018633_010--Hb_077694_010 Hb_005834_050 Hb_005834_050 Hb_002995_010--Hb_005834_050 Hb_002311_500 Hb_002311_500 Hb_002995_010--Hb_002311_500 Hb_001776_130 Hb_001776_130 Hb_002995_010--Hb_001776_130 Hb_000035_150 Hb_000035_150 Hb_002995_010--Hb_000035_150 Hb_002817_030 Hb_002817_030 Hb_002995_010--Hb_002817_030 Hb_004567_070 Hb_004567_070 Hb_002995_010--Hb_004567_070 Hb_003077_060 Hb_003077_060 Hb_002107_110--Hb_003077_060 Hb_000359_260 Hb_000359_260 Hb_002107_110--Hb_000359_260 Hb_092458_010 Hb_092458_010 Hb_002107_110--Hb_092458_010 Hb_000495_050 Hb_000495_050 Hb_002107_110--Hb_000495_050 Hb_001635_230 Hb_001635_230 Hb_002107_110--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_002107_110--Hb_002615_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.03511 4.41547 0.993154 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0167381 0.0131712 0 0.847011 0.420415

CAGE analysis