Hb_005599_020

Information

Type -
Description -
Location Contig5599: 39153-46142
Sequence    

Annotation

kegg
ID rcu:RCOM_1401100
description Protein MLO, putative
nr
ID XP_002526372.1
description Protein MLO, putative [Ricinus communis]
swissprot
ID Q94KB7
description MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2
trembl
ID B9SK53
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005599_020 0.0 - - Protein MLO, putative [Ricinus communis]
2 Hb_034585_070 0.1000813121 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
3 Hb_140000_010 0.105115838 - - receptor-kinase, putative [Ricinus communis]
4 Hb_018633_010 0.1201457805 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_065256_010 0.1231131152 - - tryptophan synthase beta chain, putative [Ricinus communis]
6 Hb_000035_140 0.1374243132 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
7 Hb_000111_240 0.1439096961 - - PREDICTED: glutamate receptor 2.8-like [Elaeis guineensis]
8 Hb_086614_010 0.1479853916 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X1 [Jatropha curcas]
9 Hb_000140_250 0.1522757925 - - Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis]
10 Hb_001001_010 0.1530545385 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
11 Hb_103709_010 0.1622637352 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
12 Hb_002477_170 0.1649379295 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_149985_030 0.1669120472 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
14 Hb_005695_070 0.1711209868 - - Cysteine-rich RLK 29 [Theobroma cacao]
15 Hb_010407_150 0.1718388162 transcription factor TF Family: MYB hypothetical protein POPTR_0008s16660g [Populus trichocarpa]
16 Hb_000349_170 0.1741165448 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
17 Hb_135714_010 0.1765590032 - - hypothetical protein POPTR_0017s09310g, partial [Populus trichocarpa]
18 Hb_000280_100 0.1793484512 - - hypothetical protein JCGZ_13378 [Jatropha curcas]
19 Hb_027065_010 0.180230123 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Populus euphratica]
20 Hb_000417_270 0.1803149494 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005599_020 Hb_005599_020 Hb_034585_070 Hb_034585_070 Hb_005599_020--Hb_034585_070 Hb_140000_010 Hb_140000_010 Hb_005599_020--Hb_140000_010 Hb_018633_010 Hb_018633_010 Hb_005599_020--Hb_018633_010 Hb_065256_010 Hb_065256_010 Hb_005599_020--Hb_065256_010 Hb_000035_140 Hb_000035_140 Hb_005599_020--Hb_000035_140 Hb_000111_240 Hb_000111_240 Hb_005599_020--Hb_000111_240 Hb_034585_070--Hb_140000_010 Hb_006789_030 Hb_006789_030 Hb_034585_070--Hb_006789_030 Hb_031685_010 Hb_031685_010 Hb_034585_070--Hb_031685_010 Hb_034585_070--Hb_065256_010 Hb_005888_050 Hb_005888_050 Hb_034585_070--Hb_005888_050 Hb_140000_010--Hb_018633_010 Hb_140000_010--Hb_000111_240 Hb_140000_010--Hb_031685_010 Hb_140000_010--Hb_006789_030 Hb_018633_010--Hb_000111_240 Hb_086614_010 Hb_086614_010 Hb_018633_010--Hb_086614_010 Hb_001581_040 Hb_001581_040 Hb_018633_010--Hb_001581_040 Hb_077694_010 Hb_077694_010 Hb_018633_010--Hb_077694_010 Hb_005511_080 Hb_005511_080 Hb_065256_010--Hb_005511_080 Hb_005888_060 Hb_005888_060 Hb_065256_010--Hb_005888_060 Hb_000479_340 Hb_000479_340 Hb_065256_010--Hb_000479_340 Hb_103709_010 Hb_103709_010 Hb_065256_010--Hb_103709_010 Hb_115962_010 Hb_115962_010 Hb_000035_140--Hb_115962_010 Hb_001660_080 Hb_001660_080 Hb_000035_140--Hb_001660_080 Hb_189208_060 Hb_189208_060 Hb_000035_140--Hb_189208_060 Hb_001160_050 Hb_001160_050 Hb_000035_140--Hb_001160_050 Hb_004551_010 Hb_004551_010 Hb_000035_140--Hb_004551_010 Hb_012496_020 Hb_012496_020 Hb_000035_140--Hb_012496_020 Hb_000111_240--Hb_001581_040 Hb_000771_040 Hb_000771_040 Hb_000111_240--Hb_000771_040 Hb_000111_240--Hb_086614_010 Hb_000111_240--Hb_077694_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.539561 1.45512 0.0933371 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0563188 0.255195

CAGE analysis