Hb_103709_010

Information

Type -
Description -
Location Contig103709: 1796-2518
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID Q9SHI3
description Receptor-like protein 2 OS=Arabidopsis thaliana GN=RLP2 PE=2 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0016021
description lrr receptor-like serine threonine-protein kinase gso1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103709_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_012084_010 0.0607293559 - - cold regulated protein [Manihot esculenta]
3 Hb_149985_030 0.1014857415 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
4 Hb_008059_040 0.1085902829 - - hypothetical protein POPTR_0019s12360g [Populus trichocarpa]
5 Hb_022406_010 0.1114527956 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_001218_060 0.1249871024 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001606_040 0.1260103896 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
8 Hb_005839_080 0.1396563531 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
9 Hb_065256_010 0.1401989322 - - tryptophan synthase beta chain, putative [Ricinus communis]
10 Hb_000349_170 0.1405526774 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
11 Hb_000280_100 0.1417660066 - - hypothetical protein JCGZ_13378 [Jatropha curcas]
12 Hb_003964_050 0.1434151581 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 25-like [Jatropha curcas]
13 Hb_005511_080 0.1462871006 - - Protein MLO, putative [Ricinus communis]
14 Hb_002918_170 0.1464348577 - - PREDICTED: MACPF domain-containing protein NSL1 [Jatropha curcas]
15 Hb_012633_010 0.1491148193 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]
16 Hb_003077_010 0.1535504328 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_005695_070 0.1551324373 - - Cysteine-rich RLK 29 [Theobroma cacao]
18 Hb_078954_020 0.155511901 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
19 Hb_104014_010 0.1555934897 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
20 Hb_006519_020 0.1586400917 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_103709_010 Hb_103709_010 Hb_012084_010 Hb_012084_010 Hb_103709_010--Hb_012084_010 Hb_149985_030 Hb_149985_030 Hb_103709_010--Hb_149985_030 Hb_008059_040 Hb_008059_040 Hb_103709_010--Hb_008059_040 Hb_022406_010 Hb_022406_010 Hb_103709_010--Hb_022406_010 Hb_001218_060 Hb_001218_060 Hb_103709_010--Hb_001218_060 Hb_001606_040 Hb_001606_040 Hb_103709_010--Hb_001606_040 Hb_012084_010--Hb_001606_040 Hb_012084_010--Hb_022406_010 Hb_003964_050 Hb_003964_050 Hb_012084_010--Hb_003964_050 Hb_012084_010--Hb_001218_060 Hb_005839_080 Hb_005839_080 Hb_012084_010--Hb_005839_080 Hb_149985_030--Hb_022406_010 Hb_000349_170 Hb_000349_170 Hb_149985_030--Hb_000349_170 Hb_005695_070 Hb_005695_070 Hb_149985_030--Hb_005695_070 Hb_001913_070 Hb_001913_070 Hb_149985_030--Hb_001913_070 Hb_149985_030--Hb_001606_040 Hb_008059_040--Hb_012084_010 Hb_008059_040--Hb_003964_050 Hb_008059_040--Hb_001218_060 Hb_078954_020 Hb_078954_020 Hb_008059_040--Hb_078954_020 Hb_008059_040--Hb_005839_080 Hb_022406_010--Hb_001606_040 Hb_006519_020 Hb_006519_020 Hb_022406_010--Hb_006519_020 Hb_169753_010 Hb_169753_010 Hb_022406_010--Hb_169753_010 Hb_022406_010--Hb_005695_070 Hb_000282_010 Hb_000282_010 Hb_001218_060--Hb_000282_010 Hb_001123_340 Hb_001123_340 Hb_001218_060--Hb_001123_340 Hb_001218_060--Hb_078954_020 Hb_005511_080 Hb_005511_080 Hb_001218_060--Hb_005511_080 Hb_003077_010 Hb_003077_010 Hb_001218_060--Hb_003077_010 Hb_001606_040--Hb_006519_020 Hb_001606_040--Hb_003077_010 Hb_088118_010 Hb_088118_010 Hb_001606_040--Hb_088118_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.768897 6.29025 0.333343 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.222425 0.845365

CAGE analysis