Hb_000282_010

Information

Type -
Description -
Location Contig282: 25288-26425
Sequence    

Annotation

kegg
ID rcu:RCOM_0797770
description hypothetical protein
nr
ID XP_002516457.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID O80992
description Abscisic acid receptor PYL2 OS=Arabidopsis thaliana GN=PYL2 PE=1 SV=1
trembl
ID B9RRT8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797770 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29509: 25002-25551 , PASA_asmbl_29510: 25678-25935
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000282_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_078954_020 0.0504987819 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
3 Hb_001218_060 0.0649334414 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001926_010 0.0696818457 - - hypothetical protein Csa_2G383910 [Cucumis sativus]
5 Hb_001123_340 0.0718566419 - - PREDICTED: uncharacterized protein LOC105123089 isoform X1 [Populus euphratica]
6 Hb_001921_040 0.0910738925 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
7 Hb_088118_010 0.0960043584 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
8 Hb_063584_010 0.1000268939 - - hypothetical protein JCGZ_10530 [Jatropha curcas]
9 Hb_089736_010 0.1093111014 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 7 [Populus euphratica]
10 Hb_005198_010 0.1102466093 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
11 Hb_177533_010 0.1104409833 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
12 Hb_000152_200 0.1142762967 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
13 Hb_019762_030 0.1148372868 - - hypothetical protein POPTR_0002s08720g [Populus trichocarpa]
14 Hb_000556_050 0.1194219139 - - -
15 Hb_002235_260 0.1197898839 transcription factor TF Family: MYB hypothetical protein POPTR_0017s12230g [Populus trichocarpa]
16 Hb_000187_100 0.1203268225 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
17 Hb_004117_060 0.1225889361 - - PREDICTED: GDSL esterase/lipase At1g33811 [Jatropha curcas]
18 Hb_003077_010 0.1242083796 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_000816_080 0.1248738052 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
20 Hb_000853_340 0.1251018857 - - PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_000282_010 Hb_000282_010 Hb_078954_020 Hb_078954_020 Hb_000282_010--Hb_078954_020 Hb_001218_060 Hb_001218_060 Hb_000282_010--Hb_001218_060 Hb_001926_010 Hb_001926_010 Hb_000282_010--Hb_001926_010 Hb_001123_340 Hb_001123_340 Hb_000282_010--Hb_001123_340 Hb_001921_040 Hb_001921_040 Hb_000282_010--Hb_001921_040 Hb_088118_010 Hb_088118_010 Hb_000282_010--Hb_088118_010 Hb_078954_020--Hb_001218_060 Hb_078954_020--Hb_001123_340 Hb_078954_020--Hb_001926_010 Hb_000152_200 Hb_000152_200 Hb_078954_020--Hb_000152_200 Hb_063584_010 Hb_063584_010 Hb_078954_020--Hb_063584_010 Hb_001218_060--Hb_001123_340 Hb_005511_080 Hb_005511_080 Hb_001218_060--Hb_005511_080 Hb_012084_010 Hb_012084_010 Hb_001218_060--Hb_012084_010 Hb_003077_010 Hb_003077_010 Hb_001218_060--Hb_003077_010 Hb_001926_010--Hb_001921_040 Hb_002235_260 Hb_002235_260 Hb_001926_010--Hb_002235_260 Hb_001926_010--Hb_001123_340 Hb_019762_030 Hb_019762_030 Hb_001926_010--Hb_019762_030 Hb_004117_060 Hb_004117_060 Hb_001926_010--Hb_004117_060 Hb_089736_010 Hb_089736_010 Hb_001123_340--Hb_089736_010 Hb_000187_100 Hb_000187_100 Hb_001123_340--Hb_000187_100 Hb_000264_160 Hb_000264_160 Hb_001123_340--Hb_000264_160 Hb_001921_040--Hb_002235_260 Hb_001921_040--Hb_004117_060 Hb_000243_180 Hb_000243_180 Hb_001921_040--Hb_000243_180 Hb_005198_010 Hb_005198_010 Hb_001921_040--Hb_005198_010 Hb_003226_040 Hb_003226_040 Hb_001921_040--Hb_003226_040 Hb_088118_010--Hb_089736_010 Hb_000816_080 Hb_000816_080 Hb_088118_010--Hb_000816_080 Hb_054615_010 Hb_054615_010 Hb_088118_010--Hb_054615_010 Hb_088118_010--Hb_001926_010 Hb_088118_010--Hb_001921_040 Hb_004007_080 Hb_004007_080 Hb_088118_010--Hb_004007_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.312658 11.4569 0.741648 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0327978 1.54601

CAGE analysis