Hb_000152_200

Information

Type -
Description -
Location Contig152: 164540-171188
Sequence    

Annotation

kegg
ID rcu:RCOM_1498760
description erecta, putative (EC:2.7.12.2 3.1.3.16)
nr
ID XP_012090380.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
swissprot
ID Q6XAT2
description LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1
trembl
ID A0A067JEQ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26207 PE=3 SV=1
Gene Ontology
ID GO:0016021
description lrr receptor-like serine threonine-protein kinase erl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12960: 164434-168901 , PASA_asmbl_12961: 164434-171216 , PASA_asmbl_12962: 168218-171175
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_200 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
2 Hb_000005_160 0.0526349557 - - tonoplast intrinsic protein, putative [Ricinus communis]
3 Hb_177533_010 0.0561771246 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
4 Hb_007741_010 0.0577979203 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
5 Hb_000544_150 0.0769464785 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
6 Hb_000556_050 0.0774873488 - - -
7 Hb_005198_010 0.0790007427 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
8 Hb_000329_220 0.0802634999 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
9 Hb_000505_030 0.0808647303 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004881_040 0.0842294888 - - PREDICTED: protodermal factor 1-like [Populus euphratica]
11 Hb_007558_060 0.0857239849 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]
12 Hb_002045_020 0.0878351267 transcription factor TF Family: AUX/IAA auxin-induced protein aux28 [Populus trichocarpa]
13 Hb_000023_030 0.0888405824 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
14 Hb_000731_030 0.0896599508 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
15 Hb_000190_200 0.0928363913 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
16 Hb_008642_020 0.0974603547 - - sterol desaturase, putative [Ricinus communis]
17 Hb_005550_060 0.0985661804 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
18 Hb_006909_050 0.1012021412 transcription factor TF Family: OFP hypothetical protein POPTR_0008s01840g [Populus trichocarpa]
19 Hb_004090_010 0.1018075341 - - Major latex protein, putative [Ricinus communis]
20 Hb_001519_080 0.1034951621 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]

Gene co-expression network

sample Hb_000152_200 Hb_000152_200 Hb_000005_160 Hb_000005_160 Hb_000152_200--Hb_000005_160 Hb_177533_010 Hb_177533_010 Hb_000152_200--Hb_177533_010 Hb_007741_010 Hb_007741_010 Hb_000152_200--Hb_007741_010 Hb_000544_150 Hb_000544_150 Hb_000152_200--Hb_000544_150 Hb_000556_050 Hb_000556_050 Hb_000152_200--Hb_000556_050 Hb_005198_010 Hb_005198_010 Hb_000152_200--Hb_005198_010 Hb_000005_160--Hb_007741_010 Hb_000005_160--Hb_000544_150 Hb_000023_030 Hb_000023_030 Hb_000005_160--Hb_000023_030 Hb_000005_160--Hb_000556_050 Hb_002045_020 Hb_002045_020 Hb_000005_160--Hb_002045_020 Hb_177533_010--Hb_000005_160 Hb_006909_050 Hb_006909_050 Hb_177533_010--Hb_006909_050 Hb_177533_010--Hb_005198_010 Hb_177533_010--Hb_000556_050 Hb_177533_010--Hb_007741_010 Hb_000329_220 Hb_000329_220 Hb_007741_010--Hb_000329_220 Hb_007741_010--Hb_000544_150 Hb_000190_200 Hb_000190_200 Hb_007741_010--Hb_000190_200 Hb_004881_040 Hb_004881_040 Hb_007741_010--Hb_004881_040 Hb_005550_060 Hb_005550_060 Hb_000544_150--Hb_005550_060 Hb_000005_390 Hb_000005_390 Hb_000544_150--Hb_000005_390 Hb_008642_020 Hb_008642_020 Hb_000544_150--Hb_008642_020 Hb_002376_020 Hb_002376_020 Hb_000544_150--Hb_002376_020 Hb_000556_050--Hb_005198_010 Hb_019762_030 Hb_019762_030 Hb_000556_050--Hb_019762_030 Hb_000556_050--Hb_007741_010 Hb_005198_010--Hb_019762_030 Hb_005198_010--Hb_000005_160 Hb_004117_060 Hb_004117_060 Hb_005198_010--Hb_004117_060 Hb_002235_260 Hb_002235_260 Hb_005198_010--Hb_002235_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0596385 11.3845 0.63125 0.0062742 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.739745

CAGE analysis