Hb_000544_150

Information

Type transcription factor
Description TF Family: HB
Location Contig544: 206512-208565
Sequence    

Annotation

kegg
ID rcu:RCOM_0161240
description Protein WUSCHEL, putative
nr
ID XP_012088544.1
description PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
swissprot
ID Q6X7K0
description WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2
trembl
ID A0A067JV94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27080 PE=4 SV=1
Gene Ontology
ID GO:0005634
description wuschel-related homeobox 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47936: 206389-206600 , PASA_asmbl_47937: 206818-208066
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000544_150 0.0 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
2 Hb_005550_060 0.0293535792 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
3 Hb_007741_010 0.0465479481 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
4 Hb_000005_390 0.0498685361 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
5 Hb_000005_160 0.057549002 - - tonoplast intrinsic protein, putative [Ricinus communis]
6 Hb_008642_020 0.0590873506 - - sterol desaturase, putative [Ricinus communis]
7 Hb_002376_020 0.059397876 - - lectin, partial [Lathyrus palustris]
8 Hb_004881_040 0.0597464258 - - PREDICTED: protodermal factor 1-like [Populus euphratica]
9 Hb_000190_200 0.0638279752 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
10 Hb_008252_010 0.0645047295 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
11 Hb_162008_020 0.0670150691 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
12 Hb_000329_220 0.0712096745 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
13 Hb_007558_060 0.0746273301 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]
14 Hb_002045_020 0.0752988102 transcription factor TF Family: AUX/IAA auxin-induced protein aux28 [Populus trichocarpa]
15 Hb_005170_050 0.0754827986 - - PREDICTED: double-stranded RNA-binding protein 2-like [Populus euphratica]
16 Hb_000152_200 0.0769464785 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL2 isoform X1 [Jatropha curcas]
17 Hb_001652_090 0.0839486326 - - conserved hypothetical protein [Ricinus communis]
18 Hb_006485_020 0.0858782701 - - hypothetical protein JCGZ_15092 [Jatropha curcas]
19 Hb_001680_060 0.0860094209 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001519_080 0.0870121227 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]

Gene co-expression network

sample Hb_000544_150 Hb_000544_150 Hb_005550_060 Hb_005550_060 Hb_000544_150--Hb_005550_060 Hb_007741_010 Hb_007741_010 Hb_000544_150--Hb_007741_010 Hb_000005_390 Hb_000005_390 Hb_000544_150--Hb_000005_390 Hb_000005_160 Hb_000005_160 Hb_000544_150--Hb_000005_160 Hb_008642_020 Hb_008642_020 Hb_000544_150--Hb_008642_020 Hb_002376_020 Hb_002376_020 Hb_000544_150--Hb_002376_020 Hb_005550_060--Hb_000005_390 Hb_005550_060--Hb_002376_020 Hb_005550_060--Hb_008642_020 Hb_005170_050 Hb_005170_050 Hb_005550_060--Hb_005170_050 Hb_006485_020 Hb_006485_020 Hb_005550_060--Hb_006485_020 Hb_007741_010--Hb_000005_160 Hb_000329_220 Hb_000329_220 Hb_007741_010--Hb_000329_220 Hb_000190_200 Hb_000190_200 Hb_007741_010--Hb_000190_200 Hb_000152_200 Hb_000152_200 Hb_007741_010--Hb_000152_200 Hb_004881_040 Hb_004881_040 Hb_007741_010--Hb_004881_040 Hb_001652_090 Hb_001652_090 Hb_000005_390--Hb_001652_090 Hb_000005_390--Hb_008642_020 Hb_000563_110 Hb_000563_110 Hb_000005_390--Hb_000563_110 Hb_000005_390--Hb_006485_020 Hb_000005_160--Hb_000152_200 Hb_000023_030 Hb_000023_030 Hb_000005_160--Hb_000023_030 Hb_000556_050 Hb_000556_050 Hb_000005_160--Hb_000556_050 Hb_002045_020 Hb_002045_020 Hb_000005_160--Hb_002045_020 Hb_007558_060 Hb_007558_060 Hb_008642_020--Hb_007558_060 Hb_008642_020--Hb_000563_110 Hb_008642_020--Hb_005170_050 Hb_008252_010 Hb_008252_010 Hb_002376_020--Hb_008252_010 Hb_002376_020--Hb_006485_020 Hb_002376_020--Hb_005170_050 Hb_000155_280 Hb_000155_280 Hb_002376_020--Hb_000155_280 Hb_002376_020--Hb_000005_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.9066 0.135299 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0683849

CAGE analysis