Hb_088118_010

Information

Type -
Description -
Location Contig88118: 1554-3590
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0016020
description lrr receptor-like serine threonine-protein kinase gso1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_088118_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_089736_010 0.0552098488 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 7 [Populus euphratica]
3 Hb_000816_080 0.0754043208 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
4 Hb_054615_010 0.0796876326 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
5 Hb_001926_010 0.0852429045 - - hypothetical protein Csa_2G383910 [Cucumis sativus]
6 Hb_001921_040 0.0857463209 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
7 Hb_004007_080 0.0932592938 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
8 Hb_052530_010 0.0937343564 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
9 Hb_001123_340 0.0955838962 - - PREDICTED: uncharacterized protein LOC105123089 isoform X1 [Populus euphratica]
10 Hb_000282_010 0.0960043584 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000243_180 0.0981887966 - - PREDICTED: aldehyde dehydrogenase family 3 member F1 [Jatropha curcas]
12 Hb_001606_040 0.1004380879 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
13 Hb_006519_020 0.1016699442 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
14 Hb_003226_040 0.1049711016 - - PREDICTED: endoglucanase 17 [Populus euphratica]
15 Hb_007681_020 0.1061027028 - - transferase, putative [Ricinus communis]
16 Hb_004003_020 0.1073957298 - - unnamed protein product [Coffea canephora]
17 Hb_000436_110 0.107532074 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
18 Hb_001677_070 0.1081189023 - - PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Jatropha curcas]
19 Hb_002235_260 0.1122049374 transcription factor TF Family: MYB hypothetical protein POPTR_0017s12230g [Populus trichocarpa]
20 Hb_022406_010 0.1138167229 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_088118_010 Hb_088118_010 Hb_089736_010 Hb_089736_010 Hb_088118_010--Hb_089736_010 Hb_000816_080 Hb_000816_080 Hb_088118_010--Hb_000816_080 Hb_054615_010 Hb_054615_010 Hb_088118_010--Hb_054615_010 Hb_001926_010 Hb_001926_010 Hb_088118_010--Hb_001926_010 Hb_001921_040 Hb_001921_040 Hb_088118_010--Hb_001921_040 Hb_004007_080 Hb_004007_080 Hb_088118_010--Hb_004007_080 Hb_089736_010--Hb_054615_010 Hb_001123_340 Hb_001123_340 Hb_089736_010--Hb_001123_340 Hb_074240_030 Hb_074240_030 Hb_089736_010--Hb_074240_030 Hb_089736_010--Hb_001926_010 Hb_003387_010 Hb_003387_010 Hb_089736_010--Hb_003387_010 Hb_052530_010 Hb_052530_010 Hb_000816_080--Hb_052530_010 Hb_002079_100 Hb_002079_100 Hb_000816_080--Hb_002079_100 Hb_003226_040 Hb_003226_040 Hb_000816_080--Hb_003226_040 Hb_000816_080--Hb_004007_080 Hb_007558_060 Hb_007558_060 Hb_000816_080--Hb_007558_060 Hb_004003_020 Hb_004003_020 Hb_054615_010--Hb_004003_020 Hb_054615_010--Hb_074240_030 Hb_000152_650 Hb_000152_650 Hb_054615_010--Hb_000152_650 Hb_002121_030 Hb_002121_030 Hb_054615_010--Hb_002121_030 Hb_001926_010--Hb_001921_040 Hb_000282_010 Hb_000282_010 Hb_001926_010--Hb_000282_010 Hb_002235_260 Hb_002235_260 Hb_001926_010--Hb_002235_260 Hb_001926_010--Hb_001123_340 Hb_019762_030 Hb_019762_030 Hb_001926_010--Hb_019762_030 Hb_004117_060 Hb_004117_060 Hb_001926_010--Hb_004117_060 Hb_001921_040--Hb_002235_260 Hb_001921_040--Hb_004117_060 Hb_000243_180 Hb_000243_180 Hb_001921_040--Hb_000243_180 Hb_005198_010 Hb_005198_010 Hb_001921_040--Hb_005198_010 Hb_001921_040--Hb_003226_040 Hb_000527_030 Hb_000527_030 Hb_004007_080--Hb_000527_030 Hb_006519_020 Hb_006519_020 Hb_004007_080--Hb_006519_020 Hb_004007_080--Hb_052530_010 Hb_103339_010 Hb_103339_010 Hb_004007_080--Hb_103339_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0932039 3.64686 0.506769 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0415289 0.441518

CAGE analysis