Hb_004007_080

Information

Type -
Description -
Location Contig4007: 71778-74514
Sequence    

Annotation

kegg
ID rcu:RCOM_0580200
description protein binding protein, putative
nr
ID XP_012079405.1
description PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
swissprot
ID Q9M2W8
description BTB/POZ domain-containing protein At3g49900 OS=Arabidopsis thaliana GN=At3g49900 PE=2 SV=1
trembl
ID A0A067KJR2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12535 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39841: 72123-72441 , PASA_asmbl_39842: 72514-73144 , PASA_asmbl_39843: 73170-74535
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004007_080 0.0 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
2 Hb_000527_030 0.0666767909 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
3 Hb_006519_020 0.0839170215 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
4 Hb_052530_010 0.092681793 - - PREDICTED: uncharacterized protein At3g49140 isoform X2 [Jatropha curcas]
5 Hb_000816_080 0.0927033086 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
6 Hb_088118_010 0.0932592938 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
7 Hb_103339_010 0.0952802519 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_001564_100 0.0953171151 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
9 Hb_004459_030 0.0977642377 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
10 Hb_004422_030 0.0995491822 - - PREDICTED: serine/threonine-protein kinase SAPK7-like [Jatropha curcas]
11 Hb_169753_010 0.1007620381 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
12 Hb_002453_040 0.1017286744 - - PREDICTED: uncharacterized protein LOC105636487 [Jatropha curcas]
13 Hb_074660_010 0.1024988788 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
14 Hb_158845_010 0.1046980482 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Jatropha curcas]
15 Hb_011859_010 0.1067743505 - - hypothetical protein VITISV_027923 [Vitis vinifera]
16 Hb_015299_040 0.1094706388 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 [Jatropha curcas]
17 Hb_000083_280 0.1098573825 - - copper ion binding protein, putative [Ricinus communis]
18 Hb_008406_150 0.1105514298 - - PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1 [Jatropha curcas]
19 Hb_000445_320 0.112103835 - - PREDICTED: wall-associated receptor kinase 2-like isoform X2 [Gossypium raimondii]
20 Hb_006332_030 0.1139004363 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]

Gene co-expression network

sample Hb_004007_080 Hb_004007_080 Hb_000527_030 Hb_000527_030 Hb_004007_080--Hb_000527_030 Hb_006519_020 Hb_006519_020 Hb_004007_080--Hb_006519_020 Hb_052530_010 Hb_052530_010 Hb_004007_080--Hb_052530_010 Hb_000816_080 Hb_000816_080 Hb_004007_080--Hb_000816_080 Hb_088118_010 Hb_088118_010 Hb_004007_080--Hb_088118_010 Hb_103339_010 Hb_103339_010 Hb_004007_080--Hb_103339_010 Hb_002453_040 Hb_002453_040 Hb_000527_030--Hb_002453_040 Hb_000527_030--Hb_052530_010 Hb_074660_010 Hb_074660_010 Hb_000527_030--Hb_074660_010 Hb_004241_160 Hb_004241_160 Hb_000527_030--Hb_004241_160 Hb_000083_280 Hb_000083_280 Hb_000527_030--Hb_000083_280 Hb_022406_010 Hb_022406_010 Hb_006519_020--Hb_022406_010 Hb_001606_040 Hb_001606_040 Hb_006519_020--Hb_001606_040 Hb_001040_050 Hb_001040_050 Hb_006519_020--Hb_001040_050 Hb_007681_020 Hb_007681_020 Hb_006519_020--Hb_007681_020 Hb_169753_010 Hb_169753_010 Hb_006519_020--Hb_169753_010 Hb_052530_010--Hb_002453_040 Hb_003226_040 Hb_003226_040 Hb_052530_010--Hb_003226_040 Hb_000445_320 Hb_000445_320 Hb_052530_010--Hb_000445_320 Hb_052530_010--Hb_000816_080 Hb_000193_170 Hb_000193_170 Hb_052530_010--Hb_000193_170 Hb_003464_040 Hb_003464_040 Hb_052530_010--Hb_003464_040 Hb_000816_080--Hb_088118_010 Hb_002079_100 Hb_002079_100 Hb_000816_080--Hb_002079_100 Hb_000816_080--Hb_003226_040 Hb_007558_060 Hb_007558_060 Hb_000816_080--Hb_007558_060 Hb_089736_010 Hb_089736_010 Hb_088118_010--Hb_089736_010 Hb_054615_010 Hb_054615_010 Hb_088118_010--Hb_054615_010 Hb_001926_010 Hb_001926_010 Hb_088118_010--Hb_001926_010 Hb_001921_040 Hb_001921_040 Hb_088118_010--Hb_001921_040 Hb_103339_010--Hb_000527_030 Hb_004422_030 Hb_004422_030 Hb_103339_010--Hb_004422_030 Hb_103339_010--Hb_006519_020 Hb_103339_010--Hb_169753_010 Hb_103339_010--Hb_000083_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0732875 2.26512 0.471981 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0383346 0.150852

CAGE analysis