Hb_006519_020

Information

Type -
Description -
Location Contig6519: 21878-24952
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016491
description disease resistance family protein lrr family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006519_020 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_022406_010 0.0695884021 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_004007_080 0.0839170215 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
4 Hb_001606_040 0.090065683 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
5 Hb_001040_050 0.0927545407 - - Stem-specific protein TSJT1, putative [Ricinus communis]
6 Hb_007681_020 0.0935470707 - - transferase, putative [Ricinus communis]
7 Hb_169753_010 0.0949895633 - - hypothetical protein JCGZ_18439 [Jatropha curcas]
8 Hb_088118_010 0.1016699442 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
9 Hb_012633_010 0.1028817059 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]
10 Hb_028187_010 0.1076566065 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
11 Hb_002079_100 0.1088484597 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
12 Hb_002447_060 0.1130079229 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
13 Hb_103339_010 0.1134652083 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_149985_030 0.1141553251 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
15 Hb_000816_080 0.1147056301 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
16 Hb_000527_030 0.1147536467 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
17 Hb_163140_010 0.114890029 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
18 Hb_001377_340 0.1170113929 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
19 Hb_001153_230 0.1228393965 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
20 Hb_010267_020 0.1232408195 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006519_020 Hb_006519_020 Hb_022406_010 Hb_022406_010 Hb_006519_020--Hb_022406_010 Hb_004007_080 Hb_004007_080 Hb_006519_020--Hb_004007_080 Hb_001606_040 Hb_001606_040 Hb_006519_020--Hb_001606_040 Hb_001040_050 Hb_001040_050 Hb_006519_020--Hb_001040_050 Hb_007681_020 Hb_007681_020 Hb_006519_020--Hb_007681_020 Hb_169753_010 Hb_169753_010 Hb_006519_020--Hb_169753_010 Hb_149985_030 Hb_149985_030 Hb_022406_010--Hb_149985_030 Hb_022406_010--Hb_001606_040 Hb_012084_010 Hb_012084_010 Hb_022406_010--Hb_012084_010 Hb_022406_010--Hb_169753_010 Hb_005695_070 Hb_005695_070 Hb_022406_010--Hb_005695_070 Hb_000527_030 Hb_000527_030 Hb_004007_080--Hb_000527_030 Hb_052530_010 Hb_052530_010 Hb_004007_080--Hb_052530_010 Hb_000816_080 Hb_000816_080 Hb_004007_080--Hb_000816_080 Hb_088118_010 Hb_088118_010 Hb_004007_080--Hb_088118_010 Hb_103339_010 Hb_103339_010 Hb_004007_080--Hb_103339_010 Hb_001606_040--Hb_149985_030 Hb_003077_010 Hb_003077_010 Hb_001606_040--Hb_003077_010 Hb_001606_040--Hb_012084_010 Hb_001606_040--Hb_088118_010 Hb_002447_060 Hb_002447_060 Hb_001040_050--Hb_002447_060 Hb_000115_190 Hb_000115_190 Hb_001040_050--Hb_000115_190 Hb_002079_100 Hb_002079_100 Hb_001040_050--Hb_002079_100 Hb_012633_010 Hb_012633_010 Hb_001040_050--Hb_012633_010 Hb_000347_160 Hb_000347_160 Hb_001040_050--Hb_000347_160 Hb_163140_010 Hb_163140_010 Hb_007681_020--Hb_163140_010 Hb_000051_150 Hb_000051_150 Hb_007681_020--Hb_000051_150 Hb_001377_340 Hb_001377_340 Hb_007681_020--Hb_001377_340 Hb_001153_230 Hb_001153_230 Hb_007681_020--Hb_001153_230 Hb_007681_020--Hb_088118_010 Hb_002205_160 Hb_002205_160 Hb_169753_010--Hb_002205_160 Hb_010267_020 Hb_010267_020 Hb_169753_010--Hb_010267_020 Hb_007441_290 Hb_007441_290 Hb_169753_010--Hb_007441_290 Hb_169753_010--Hb_004007_080 Hb_004422_030 Hb_004422_030 Hb_169753_010--Hb_004422_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.40149 5.88231 0.889735 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0141383 0 0 0.10148 0.427473

CAGE analysis