Hb_002447_060

Information

Type -
Description -
Location Contig2447: 62418-69956
Sequence    

Annotation

kegg
ID rcu:RCOM_0964720
description polyamine oxidase, putative (EC:1.5.3.11)
nr
ID XP_012065601.1
description PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
swissprot
ID Q9FNA2
description Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1
trembl
ID B9RVL4
description Polyamine oxidase, putative OS=Ricinus communis GN=RCOM_0964720 PE=4 SV=1
Gene Ontology
ID GO:0046592
description polyamine oxidase 1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25526: 66164-66436
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002447_060 0.0 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
2 Hb_002079_100 0.0693833431 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
3 Hb_012633_010 0.0732886847 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]
4 Hb_001040_050 0.0843118547 - - Stem-specific protein TSJT1, putative [Ricinus communis]
5 Hb_000157_060 0.092288013 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
6 Hb_028187_010 0.0979992651 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
7 Hb_000505_030 0.0997941007 - - conserved hypothetical protein [Ricinus communis]
8 Hb_006519_020 0.1130079229 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
9 Hb_000731_030 0.1177945769 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
10 Hb_163140_010 0.1184363215 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
11 Hb_007681_020 0.1207756995 - - transferase, putative [Ricinus communis]
12 Hb_001153_230 0.1228984362 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
13 Hb_001433_120 0.1262612498 - - hypothetical protein CICLE_v10003574mg, partial [Citrus clementina]
14 Hb_000115_190 0.1306674178 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
15 Hb_064971_010 0.1349139681 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
16 Hb_001519_080 0.1357436769 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
17 Hb_004724_250 0.1357451814 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
18 Hb_000816_080 0.1357748439 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
19 Hb_074660_010 0.1362521856 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
20 Hb_007558_060 0.1406099384 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]

Gene co-expression network

sample Hb_002447_060 Hb_002447_060 Hb_002079_100 Hb_002079_100 Hb_002447_060--Hb_002079_100 Hb_012633_010 Hb_012633_010 Hb_002447_060--Hb_012633_010 Hb_001040_050 Hb_001040_050 Hb_002447_060--Hb_001040_050 Hb_000157_060 Hb_000157_060 Hb_002447_060--Hb_000157_060 Hb_028187_010 Hb_028187_010 Hb_002447_060--Hb_028187_010 Hb_000505_030 Hb_000505_030 Hb_002447_060--Hb_000505_030 Hb_002079_100--Hb_000505_030 Hb_007558_060 Hb_007558_060 Hb_002079_100--Hb_007558_060 Hb_000731_030 Hb_000731_030 Hb_002079_100--Hb_000731_030 Hb_002079_100--Hb_012633_010 Hb_000816_080 Hb_000816_080 Hb_002079_100--Hb_000816_080 Hb_006519_020 Hb_006519_020 Hb_012633_010--Hb_006519_020 Hb_012633_010--Hb_001040_050 Hb_012633_010--Hb_000505_030 Hb_163140_010 Hb_163140_010 Hb_012633_010--Hb_163140_010 Hb_000115_190 Hb_000115_190 Hb_001040_050--Hb_000115_190 Hb_001040_050--Hb_006519_020 Hb_001040_050--Hb_002079_100 Hb_000347_160 Hb_000347_160 Hb_001040_050--Hb_000347_160 Hb_000157_060--Hb_028187_010 Hb_064971_010 Hb_064971_010 Hb_000157_060--Hb_064971_010 Hb_074660_010 Hb_074660_010 Hb_000157_060--Hb_074660_010 Hb_000164_030 Hb_000164_030 Hb_000157_060--Hb_000164_030 Hb_006142_020 Hb_006142_020 Hb_000157_060--Hb_006142_020 Hb_028187_010--Hb_163140_010 Hb_028187_010--Hb_006519_020 Hb_001153_230 Hb_001153_230 Hb_028187_010--Hb_001153_230 Hb_000527_030 Hb_000527_030 Hb_028187_010--Hb_000527_030 Hb_000505_030--Hb_000731_030 Hb_000505_030--Hb_007558_060 Hb_000152_200 Hb_000152_200 Hb_000505_030--Hb_000152_200 Hb_001680_060 Hb_001680_060 Hb_000505_030--Hb_001680_060 Hb_001519_080 Hb_001519_080 Hb_000505_030--Hb_001519_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0239217 17.9352 289.367 30.6316 0 0.0235143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0272181 0.342632 0.56569 0.409668 8.91208

CAGE analysis