Hb_028187_010

Information

Type -
Description -
Location Contig28187: 41-544
Sequence    

Annotation

kegg
ID pop:POPTR_0007s00830g
description POPTRDRAFT_763717; hypothetical protein
nr
ID KDP42839.1
description hypothetical protein JCGZ_23781 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23781 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at5g39020 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028187_010 0.0 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
2 Hb_000157_060 0.062487451 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
3 Hb_002447_060 0.0979992651 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
4 Hb_163140_010 0.1055558537 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
5 Hb_006519_020 0.1076566065 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
6 Hb_001153_230 0.1136522108 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
7 Hb_000527_030 0.1180257053 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
8 Hb_007681_020 0.1189274344 - - transferase, putative [Ricinus communis]
9 Hb_000164_030 0.1193359396 - - PREDICTED: RING-H2 finger protein ATL14-like [Zea mays]
10 Hb_001040_050 0.1200973254 - - Stem-specific protein TSJT1, putative [Ricinus communis]
11 Hb_003935_050 0.1263126229 - - protein with unknown function [Ricinus communis]
12 Hb_074660_010 0.1264548474 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
13 Hb_012633_010 0.1272141291 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]
14 Hb_064971_010 0.1274253402 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
15 Hb_003767_030 0.1277719186 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
16 Hb_048141_060 0.1279910537 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT3 [Populus euphratica]
17 Hb_002079_100 0.129487383 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
18 Hb_004724_250 0.1311061741 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
19 Hb_103339_010 0.1338896287 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_000115_190 0.1353087225 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]

Gene co-expression network

sample Hb_028187_010 Hb_028187_010 Hb_000157_060 Hb_000157_060 Hb_028187_010--Hb_000157_060 Hb_002447_060 Hb_002447_060 Hb_028187_010--Hb_002447_060 Hb_163140_010 Hb_163140_010 Hb_028187_010--Hb_163140_010 Hb_006519_020 Hb_006519_020 Hb_028187_010--Hb_006519_020 Hb_001153_230 Hb_001153_230 Hb_028187_010--Hb_001153_230 Hb_000527_030 Hb_000527_030 Hb_028187_010--Hb_000527_030 Hb_064971_010 Hb_064971_010 Hb_000157_060--Hb_064971_010 Hb_000157_060--Hb_002447_060 Hb_074660_010 Hb_074660_010 Hb_000157_060--Hb_074660_010 Hb_000164_030 Hb_000164_030 Hb_000157_060--Hb_000164_030 Hb_006142_020 Hb_006142_020 Hb_000157_060--Hb_006142_020 Hb_002079_100 Hb_002079_100 Hb_002447_060--Hb_002079_100 Hb_012633_010 Hb_012633_010 Hb_002447_060--Hb_012633_010 Hb_001040_050 Hb_001040_050 Hb_002447_060--Hb_001040_050 Hb_000505_030 Hb_000505_030 Hb_002447_060--Hb_000505_030 Hb_007681_020 Hb_007681_020 Hb_163140_010--Hb_007681_020 Hb_149985_030 Hb_149985_030 Hb_163140_010--Hb_149985_030 Hb_163140_010--Hb_012633_010 Hb_163140_010--Hb_006519_020 Hb_000349_170 Hb_000349_170 Hb_163140_010--Hb_000349_170 Hb_022406_010 Hb_022406_010 Hb_006519_020--Hb_022406_010 Hb_004007_080 Hb_004007_080 Hb_006519_020--Hb_004007_080 Hb_001606_040 Hb_001606_040 Hb_006519_020--Hb_001606_040 Hb_006519_020--Hb_001040_050 Hb_006519_020--Hb_007681_020 Hb_169753_010 Hb_169753_010 Hb_006519_020--Hb_169753_010 Hb_001153_230--Hb_074660_010 Hb_001153_230--Hb_000527_030 Hb_001153_230--Hb_007681_020 Hb_000816_080 Hb_000816_080 Hb_001153_230--Hb_000816_080 Hb_052530_010 Hb_052530_010 Hb_001153_230--Hb_052530_010 Hb_000527_030--Hb_004007_080 Hb_002453_040 Hb_002453_040 Hb_000527_030--Hb_002453_040 Hb_000527_030--Hb_052530_010 Hb_000527_030--Hb_074660_010 Hb_004241_160 Hb_004241_160 Hb_000527_030--Hb_004241_160 Hb_000083_280 Hb_000083_280 Hb_000527_030--Hb_000083_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.69662 55.7651 10.3466 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.132472 0 0 0.0864661 1.75415

CAGE analysis