Hb_006142_020

Information

Type -
Description -
Location Contig6142: 20602-21969
Sequence    

Annotation

kegg
ID rcu:RCOM_1319620
description nutrient reservoir, putative
nr
ID BAJ53257.1
description JHL25P11.12 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUE7
description JHL25P11.12 protein OS=Jatropha curcas GN=JHL25P11.12 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006142_020 0.0 - - JHL25P11.12 [Jatropha curcas]
2 Hb_169136_010 0.0616857023 - - conserved hypothetical protein [Ricinus communis]
3 Hb_108744_010 0.0617846938 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
4 Hb_064971_010 0.0668790876 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
5 Hb_000756_030 0.0887408604 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
6 Hb_152528_010 0.1010521578 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
7 Hb_000157_060 0.1071745657 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
8 Hb_002486_090 0.1116347865 - - hypothetical protein POPTR_0005s06910g [Populus trichocarpa]
9 Hb_000164_030 0.1119072883 - - PREDICTED: RING-H2 finger protein ATL14-like [Zea mays]
10 Hb_032011_020 0.1181619486 - - alpha-farnesene synthase [Ricinus communis]
11 Hb_002837_120 0.1188611893 - - PREDICTED: legumin A-like [Jatropha curcas]
12 Hb_004800_030 0.1206140872 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
13 Hb_074660_010 0.1235975607 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
14 Hb_000739_250 0.1249770812 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]
15 Hb_005649_070 0.1278547616 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000160_110 0.1292672566 - - PREDICTED: uncharacterized protein LOC100253584 [Vitis vinifera]
17 Hb_023558_010 0.132639052 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
18 Hb_004724_250 0.1344171354 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
19 Hb_048141_060 0.1384034533 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT3 [Populus euphratica]
20 Hb_004117_240 0.1388568658 - - protease inhibitor/seed storage/ltp family [Cicer arietinum]

Gene co-expression network

sample Hb_006142_020 Hb_006142_020 Hb_169136_010 Hb_169136_010 Hb_006142_020--Hb_169136_010 Hb_108744_010 Hb_108744_010 Hb_006142_020--Hb_108744_010 Hb_064971_010 Hb_064971_010 Hb_006142_020--Hb_064971_010 Hb_000756_030 Hb_000756_030 Hb_006142_020--Hb_000756_030 Hb_152528_010 Hb_152528_010 Hb_006142_020--Hb_152528_010 Hb_000157_060 Hb_000157_060 Hb_006142_020--Hb_000157_060 Hb_032011_020 Hb_032011_020 Hb_169136_010--Hb_032011_020 Hb_002837_120 Hb_002837_120 Hb_169136_010--Hb_002837_120 Hb_023558_010 Hb_023558_010 Hb_169136_010--Hb_023558_010 Hb_007975_070 Hb_007975_070 Hb_169136_010--Hb_007975_070 Hb_105767_030 Hb_105767_030 Hb_169136_010--Hb_105767_030 Hb_108744_010--Hb_000756_030 Hb_108744_010--Hb_152528_010 Hb_000654_060 Hb_000654_060 Hb_108744_010--Hb_000654_060 Hb_108744_010--Hb_169136_010 Hb_005649_070 Hb_005649_070 Hb_108744_010--Hb_005649_070 Hb_004724_250 Hb_004724_250 Hb_064971_010--Hb_004724_250 Hb_000164_030 Hb_000164_030 Hb_064971_010--Hb_000164_030 Hb_064971_010--Hb_000157_060 Hb_002486_090 Hb_002486_090 Hb_064971_010--Hb_002486_090 Hb_048141_060 Hb_048141_060 Hb_064971_010--Hb_048141_060 Hb_000756_030--Hb_152528_010 Hb_000756_030--Hb_000654_060 Hb_004241_140 Hb_004241_140 Hb_000756_030--Hb_004241_140 Hb_001398_110 Hb_001398_110 Hb_000756_030--Hb_001398_110 Hb_152528_010--Hb_000654_060 Hb_152528_010--Hb_001398_110 Hb_022845_010 Hb_022845_010 Hb_152528_010--Hb_022845_010 Hb_152528_010--Hb_004241_140 Hb_028187_010 Hb_028187_010 Hb_000157_060--Hb_028187_010 Hb_002447_060 Hb_002447_060 Hb_000157_060--Hb_002447_060 Hb_074660_010 Hb_074660_010 Hb_000157_060--Hb_074660_010 Hb_000157_060--Hb_000164_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0269995 0.543837 0.13243 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis