Hb_023558_010

Information

Type -
Description -
Location Contig23558: 4133-6948
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001798mg
description hypothetical protein
nr
ID XP_012078825.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID M5VVP9
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001798mg PE=4 SV=1
Gene Ontology
ID GO:0044464
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24640: 4590-5119
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023558_010 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_032011_020 0.0495277421 - - alpha-farnesene synthase [Ricinus communis]
3 Hb_000417_240 0.0683592652 - - PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
4 Hb_003995_040 0.0683606331 - - PREDICTED: tropinone reductase homolog At2g29290-like [Jatropha curcas]
5 Hb_000173_070 0.0683713397 transcription factor TF Family: bHLH PREDICTED: transcription factor MUTE [Jatropha curcas]
6 Hb_000307_080 0.0683990114 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007975_070 0.0684939724 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
8 Hb_000280_070 0.0684958278 - - PREDICTED: PCTP-like protein isoform X1 [Jatropha curcas]
9 Hb_000784_050 0.0685311726 - - PREDICTED: auxin-induced protein X10A-like [Nelumbo nucifera]
10 Hb_105767_030 0.0685968988 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002151_140 0.0686759 - - PREDICTED: lichenase-2-like [Pyrus x bretschneideri]
12 Hb_003667_030 0.0696466142 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL15 [Jatropha curcas]
13 Hb_130862_010 0.0699774037 - - purine permease, putative [Ricinus communis]
14 Hb_000489_050 0.0700762381 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
15 Hb_090511_010 0.0704919862 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
16 Hb_012675_030 0.070567445 - - hypothetical protein POPTR_0013s04780g [Populus trichocarpa]
17 Hb_000334_100 0.0709294818 - - hypothetical protein JCGZ_16788 [Jatropha curcas]
18 Hb_022092_100 0.070963936 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000769_040 0.0719017713 - - hypothetical protein VITISV_028082 [Vitis vinifera]
20 Hb_000008_100 0.0719628589 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]

Gene co-expression network

sample Hb_023558_010 Hb_023558_010 Hb_032011_020 Hb_032011_020 Hb_023558_010--Hb_032011_020 Hb_000417_240 Hb_000417_240 Hb_023558_010--Hb_000417_240 Hb_003995_040 Hb_003995_040 Hb_023558_010--Hb_003995_040 Hb_000173_070 Hb_000173_070 Hb_023558_010--Hb_000173_070 Hb_000307_080 Hb_000307_080 Hb_023558_010--Hb_000307_080 Hb_007975_070 Hb_007975_070 Hb_023558_010--Hb_007975_070 Hb_169136_010 Hb_169136_010 Hb_032011_020--Hb_169136_010 Hb_022092_100 Hb_022092_100 Hb_032011_020--Hb_022092_100 Hb_002151_140 Hb_002151_140 Hb_032011_020--Hb_002151_140 Hb_000784_050 Hb_000784_050 Hb_032011_020--Hb_000784_050 Hb_000280_070 Hb_000280_070 Hb_032011_020--Hb_000280_070 Hb_000417_240--Hb_003995_040 Hb_000417_240--Hb_000173_070 Hb_000417_240--Hb_000307_080 Hb_000417_240--Hb_000280_070 Hb_000417_240--Hb_000784_050 Hb_000417_240--Hb_007975_070 Hb_003995_040--Hb_000173_070 Hb_003995_040--Hb_000307_080 Hb_003995_040--Hb_000280_070 Hb_003995_040--Hb_000784_050 Hb_003995_040--Hb_007975_070 Hb_000173_070--Hb_000307_080 Hb_000173_070--Hb_000280_070 Hb_000173_070--Hb_000784_050 Hb_000173_070--Hb_002151_140 Hb_000307_080--Hb_000280_070 Hb_000307_080--Hb_000784_050 Hb_000307_080--Hb_002151_140 Hb_105767_030 Hb_105767_030 Hb_007975_070--Hb_105767_030 Hb_007975_070--Hb_000173_070 Hb_007975_070--Hb_000307_080 Hb_007975_070--Hb_000280_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00716523 2.25068 0.610464 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0197335 0 0 0 0

CAGE analysis