Hb_105767_030

Information

Type -
Description -
Location Contig105767: 10209-11718
Sequence    

Annotation

kegg
ID rcu:RCOM_0591280
description hypothetical protein
nr
ID XP_002526851.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SLI2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0591280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_105767_030 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_007975_070 0.0014043201 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
3 Hb_000417_240 0.0063499433 - - PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
4 Hb_003995_040 0.0064900709 - - PREDICTED: tropinone reductase homolog At2g29290-like [Jatropha curcas]
5 Hb_000173_070 0.007170546 transcription factor TF Family: bHLH PREDICTED: transcription factor MUTE [Jatropha curcas]
6 Hb_000307_080 0.0081623503 - - conserved hypothetical protein [Ricinus communis]
7 Hb_130862_010 0.0092593172 - - purine permease, putative [Ricinus communis]
8 Hb_000280_070 0.0101241259 - - PREDICTED: PCTP-like protein isoform X1 [Jatropha curcas]
9 Hb_000784_050 0.0106487908 - - PREDICTED: auxin-induced protein X10A-like [Nelumbo nucifera]
10 Hb_090511_010 0.0115100821 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
11 Hb_012675_030 0.0118171828 - - hypothetical protein POPTR_0013s04780g [Populus trichocarpa]
12 Hb_002151_140 0.0123791794 - - PREDICTED: lichenase-2-like [Pyrus x bretschneideri]
13 Hb_000769_040 0.0166023235 - - hypothetical protein VITISV_028082 [Vitis vinifera]
14 Hb_003667_030 0.0191226098 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL15 [Jatropha curcas]
15 Hb_022862_010 0.0203950485 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
16 Hb_000489_050 0.0212137014 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
17 Hb_000193_040 0.0224293958 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
18 Hb_000334_100 0.0247231265 - - hypothetical protein JCGZ_16788 [Jatropha curcas]
19 Hb_154114_040 0.025002822 - - hypothetical protein B456_001G056600 [Gossypium raimondii]
20 Hb_000173_040 0.0257092426 - - putative xylanase inhibitor, partial [Triticum aestivum]

Gene co-expression network

sample Hb_105767_030 Hb_105767_030 Hb_007975_070 Hb_007975_070 Hb_105767_030--Hb_007975_070 Hb_000417_240 Hb_000417_240 Hb_105767_030--Hb_000417_240 Hb_003995_040 Hb_003995_040 Hb_105767_030--Hb_003995_040 Hb_000173_070 Hb_000173_070 Hb_105767_030--Hb_000173_070 Hb_000307_080 Hb_000307_080 Hb_105767_030--Hb_000307_080 Hb_130862_010 Hb_130862_010 Hb_105767_030--Hb_130862_010 Hb_007975_070--Hb_000417_240 Hb_007975_070--Hb_003995_040 Hb_007975_070--Hb_000173_070 Hb_007975_070--Hb_000307_080 Hb_000280_070 Hb_000280_070 Hb_007975_070--Hb_000280_070 Hb_000417_240--Hb_003995_040 Hb_000417_240--Hb_000173_070 Hb_000417_240--Hb_000307_080 Hb_000417_240--Hb_000280_070 Hb_000784_050 Hb_000784_050 Hb_000417_240--Hb_000784_050 Hb_003995_040--Hb_000173_070 Hb_003995_040--Hb_000307_080 Hb_003995_040--Hb_000280_070 Hb_003995_040--Hb_000784_050 Hb_000173_070--Hb_000307_080 Hb_000173_070--Hb_000280_070 Hb_000173_070--Hb_000784_050 Hb_002151_140 Hb_002151_140 Hb_000173_070--Hb_002151_140 Hb_000307_080--Hb_000280_070 Hb_000307_080--Hb_000784_050 Hb_000307_080--Hb_002151_140 Hb_090511_010 Hb_090511_010 Hb_130862_010--Hb_090511_010 Hb_012675_030 Hb_012675_030 Hb_130862_010--Hb_012675_030 Hb_000769_040 Hb_000769_040 Hb_130862_010--Hb_000769_040 Hb_130862_010--Hb_007975_070 Hb_022862_010 Hb_022862_010 Hb_130862_010--Hb_022862_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.168245 0.0441435 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis