Hb_000157_060

Information

Type -
Description -
Location Contig157: 43331-50804
Sequence    

Annotation

kegg
ID rcu:RCOM_0964720
description polyamine oxidase, putative (EC:1.5.3.11)
nr
ID XP_012065601.1
description PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
swissprot
ID Q9FNA2
description Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1
trembl
ID B9RVL4
description Polyamine oxidase, putative OS=Ricinus communis GN=RCOM_0964720 PE=4 SV=1
Gene Ontology
ID GO:0046592
description polyamine oxidase 1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000157_060 0.0 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
2 Hb_028187_010 0.062487451 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
3 Hb_064971_010 0.0915922936 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
4 Hb_002447_060 0.092288013 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
5 Hb_074660_010 0.1021593842 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
6 Hb_000164_030 0.1049588849 - - PREDICTED: RING-H2 finger protein ATL14-like [Zea mays]
7 Hb_006142_020 0.1071745657 - - JHL25P11.12 [Jatropha curcas]
8 Hb_002486_090 0.11341453 - - hypothetical protein POPTR_0005s06910g [Populus trichocarpa]
9 Hb_001040_050 0.1144733255 - - Stem-specific protein TSJT1, putative [Ricinus communis]
10 Hb_004724_250 0.1145321604 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
11 Hb_000527_030 0.1196118492 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
12 Hb_048141_060 0.1208701426 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT3 [Populus euphratica]
13 Hb_002079_100 0.1226672427 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
14 Hb_001153_230 0.1229487858 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
15 Hb_004800_030 0.1270067877 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
16 Hb_006519_020 0.1314071521 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
17 Hb_000668_190 0.1322367544 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
18 Hb_108744_010 0.1337034314 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
19 Hb_012633_010 0.1354244197 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 49 [Jatropha curcas]
20 Hb_000739_250 0.1355922623 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]

Gene co-expression network

sample Hb_000157_060 Hb_000157_060 Hb_028187_010 Hb_028187_010 Hb_000157_060--Hb_028187_010 Hb_064971_010 Hb_064971_010 Hb_000157_060--Hb_064971_010 Hb_002447_060 Hb_002447_060 Hb_000157_060--Hb_002447_060 Hb_074660_010 Hb_074660_010 Hb_000157_060--Hb_074660_010 Hb_000164_030 Hb_000164_030 Hb_000157_060--Hb_000164_030 Hb_006142_020 Hb_006142_020 Hb_000157_060--Hb_006142_020 Hb_028187_010--Hb_002447_060 Hb_163140_010 Hb_163140_010 Hb_028187_010--Hb_163140_010 Hb_006519_020 Hb_006519_020 Hb_028187_010--Hb_006519_020 Hb_001153_230 Hb_001153_230 Hb_028187_010--Hb_001153_230 Hb_000527_030 Hb_000527_030 Hb_028187_010--Hb_000527_030 Hb_064971_010--Hb_006142_020 Hb_004724_250 Hb_004724_250 Hb_064971_010--Hb_004724_250 Hb_064971_010--Hb_000164_030 Hb_002486_090 Hb_002486_090 Hb_064971_010--Hb_002486_090 Hb_048141_060 Hb_048141_060 Hb_064971_010--Hb_048141_060 Hb_002079_100 Hb_002079_100 Hb_002447_060--Hb_002079_100 Hb_012633_010 Hb_012633_010 Hb_002447_060--Hb_012633_010 Hb_001040_050 Hb_001040_050 Hb_002447_060--Hb_001040_050 Hb_000505_030 Hb_000505_030 Hb_002447_060--Hb_000505_030 Hb_074660_010--Hb_000527_030 Hb_074660_010--Hb_001153_230 Hb_001564_100 Hb_001564_100 Hb_074660_010--Hb_001564_100 Hb_004007_080 Hb_004007_080 Hb_074660_010--Hb_004007_080 Hb_002837_120 Hb_002837_120 Hb_074660_010--Hb_002837_120 Hb_000164_030--Hb_048141_060 Hb_000164_030--Hb_004724_250 Hb_005649_070 Hb_005649_070 Hb_000164_030--Hb_005649_070 Hb_002267_010 Hb_002267_010 Hb_000164_030--Hb_002267_010 Hb_169136_010 Hb_169136_010 Hb_006142_020--Hb_169136_010 Hb_108744_010 Hb_108744_010 Hb_006142_020--Hb_108744_010 Hb_000756_030 Hb_000756_030 Hb_006142_020--Hb_000756_030 Hb_152528_010 Hb_152528_010 Hb_006142_020--Hb_152528_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.98785 25.9032 4.794 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0429727 0 0.0599457 0.40641

CAGE analysis