Hb_000115_190

Information

Type -
Description -
Location Contig115: 196201-197217
Sequence    

Annotation

kegg
ID rcu:RCOM_1308620
description hypothetical protein
nr
ID XP_012082103.1
description PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZL3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18342 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000115_190 0.0 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
2 Hb_001040_050 0.0870484705 - - Stem-specific protein TSJT1, putative [Ricinus communis]
3 Hb_000028_250 0.1045142898 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
4 Hb_006519_020 0.1296946322 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
5 Hb_002447_060 0.1306674178 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
6 Hb_000388_040 0.1310895481 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
7 Hb_005162_120 0.1311902691 - - ferric reductase oxidase [Manihot esculenta]
8 Hb_002221_010 0.1328872297 - - PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
9 Hb_028187_010 0.1353087225 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
10 Hb_001377_340 0.135829552 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF023 [Jatropha curcas]
11 Hb_114292_010 0.1372626736 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002078_310 0.1399643367 - - PREDICTED: uncharacterized protein LOC105645005 [Jatropha curcas]
13 Hb_000157_060 0.1408102349 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
14 Hb_000347_160 0.1418314607 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]
15 Hb_005649_050 0.1422068761 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004007_080 0.1444064335 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]
17 Hb_001935_040 0.1447008652 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 8 [Jatropha curcas]
18 Hb_000527_030 0.1448337944 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
19 Hb_003767_030 0.1464230416 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
20 Hb_002218_050 0.147484769 - - SSXT family protein isoform 2, partial [Theobroma cacao]

Gene co-expression network

sample Hb_000115_190 Hb_000115_190 Hb_001040_050 Hb_001040_050 Hb_000115_190--Hb_001040_050 Hb_000028_250 Hb_000028_250 Hb_000115_190--Hb_000028_250 Hb_006519_020 Hb_006519_020 Hb_000115_190--Hb_006519_020 Hb_002447_060 Hb_002447_060 Hb_000115_190--Hb_002447_060 Hb_000388_040 Hb_000388_040 Hb_000115_190--Hb_000388_040 Hb_005162_120 Hb_005162_120 Hb_000115_190--Hb_005162_120 Hb_001040_050--Hb_002447_060 Hb_001040_050--Hb_006519_020 Hb_002079_100 Hb_002079_100 Hb_001040_050--Hb_002079_100 Hb_012633_010 Hb_012633_010 Hb_001040_050--Hb_012633_010 Hb_000347_160 Hb_000347_160 Hb_001040_050--Hb_000347_160 Hb_000028_250--Hb_005162_120 Hb_001377_340 Hb_001377_340 Hb_000028_250--Hb_001377_340 Hb_001755_040 Hb_001755_040 Hb_000028_250--Hb_001755_040 Hb_000028_250--Hb_000388_040 Hb_003767_030 Hb_003767_030 Hb_000028_250--Hb_003767_030 Hb_022406_010 Hb_022406_010 Hb_006519_020--Hb_022406_010 Hb_004007_080 Hb_004007_080 Hb_006519_020--Hb_004007_080 Hb_001606_040 Hb_001606_040 Hb_006519_020--Hb_001606_040 Hb_007681_020 Hb_007681_020 Hb_006519_020--Hb_007681_020 Hb_169753_010 Hb_169753_010 Hb_006519_020--Hb_169753_010 Hb_002447_060--Hb_002079_100 Hb_002447_060--Hb_012633_010 Hb_000157_060 Hb_000157_060 Hb_002447_060--Hb_000157_060 Hb_028187_010 Hb_028187_010 Hb_002447_060--Hb_028187_010 Hb_000505_030 Hb_000505_030 Hb_002447_060--Hb_000505_030 Hb_000388_040--Hb_003767_030 Hb_012753_150 Hb_012753_150 Hb_000388_040--Hb_012753_150 Hb_000349_170 Hb_000349_170 Hb_000388_040--Hb_000349_170 Hb_002218_050 Hb_002218_050 Hb_000388_040--Hb_002218_050 Hb_010267_020 Hb_010267_020 Hb_000388_040--Hb_010267_020 Hb_007441_290 Hb_007441_290 Hb_000388_040--Hb_007441_290 Hb_002639_170 Hb_002639_170 Hb_005162_120--Hb_002639_170 Hb_005162_120--Hb_002218_050 Hb_007002_050 Hb_007002_050 Hb_005162_120--Hb_007002_050 Hb_001241_020 Hb_001241_020 Hb_005162_120--Hb_001241_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.17579 20.7685 357.766 62.8801 0.0623695 0.20505
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.46629 4.48855 4.60291 2.11812 17.3477

CAGE analysis