Hb_005511_080

Information

Type -
Description -
Location Contig5511: 69418-73136
Sequence    

Annotation

kegg
ID rcu:RCOM_0332770
description Protein MLO, putative
nr
ID XP_002533246.1
description Protein MLO, putative [Ricinus communis]
swissprot
ID O80961
description MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2
trembl
ID B9T4S7
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0005886
description mlo-like protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48269: 69402-73165 , PASA_asmbl_48270: 71301-71777
cDNA
(Sanger)
(ID:Location)		 012_B19.ab1: 69409-70357

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005511_080 0.0 - - Protein MLO, putative [Ricinus communis]
2 Hb_001218_060 0.0821992613 - - conserved hypothetical protein [Ricinus communis]
3 Hb_104014_010 0.1120361964 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
4 Hb_001123_340 0.1131453428 - - PREDICTED: uncharacterized protein LOC105123089 isoform X1 [Populus euphratica]
5 Hb_002561_040 0.1184882623 - - Photosynthetic electron transfer C [Theobroma cacao]
6 Hb_065256_010 0.1203039319 - - tryptophan synthase beta chain, putative [Ricinus communis]
7 Hb_005888_060 0.1241418597 - - hypothetical protein PRUPE_ppa002432m2g, partial [Prunus persica]
8 Hb_033834_020 0.1334983268 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000479_340 0.133973739 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
10 Hb_003077_010 0.1354351991 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Jatropha curcas]
11 Hb_002918_170 0.1355910563 - - PREDICTED: MACPF domain-containing protein NSL1 [Jatropha curcas]
12 Hb_078954_020 0.1357461835 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
13 Hb_000264_160 0.136494023 - - PREDICTED: CBS domain-containing protein CBSX5-like [Jatropha curcas]
14 Hb_000282_010 0.1408601912 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001401_050 0.1419688877 - - PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Jatropha curcas]
16 Hb_005365_040 0.1424714879 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
17 Hb_004223_120 0.1444525367 - - PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
18 Hb_000187_100 0.1454549642 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
19 Hb_012084_010 0.146073026 - - cold regulated protein [Manihot esculenta]
20 Hb_103709_010 0.1462871006 - - hypothetical protein JCGZ_06105 [Jatropha curcas]

Gene co-expression network

sample Hb_005511_080 Hb_005511_080 Hb_001218_060 Hb_001218_060 Hb_005511_080--Hb_001218_060 Hb_104014_010 Hb_104014_010 Hb_005511_080--Hb_104014_010 Hb_001123_340 Hb_001123_340 Hb_005511_080--Hb_001123_340 Hb_002561_040 Hb_002561_040 Hb_005511_080--Hb_002561_040 Hb_065256_010 Hb_065256_010 Hb_005511_080--Hb_065256_010 Hb_005888_060 Hb_005888_060 Hb_005511_080--Hb_005888_060 Hb_000282_010 Hb_000282_010 Hb_001218_060--Hb_000282_010 Hb_001218_060--Hb_001123_340 Hb_078954_020 Hb_078954_020 Hb_001218_060--Hb_078954_020 Hb_012084_010 Hb_012084_010 Hb_001218_060--Hb_012084_010 Hb_003077_010 Hb_003077_010 Hb_001218_060--Hb_003077_010 Hb_000051_150 Hb_000051_150 Hb_104014_010--Hb_000051_150 Hb_001913_070 Hb_001913_070 Hb_104014_010--Hb_001913_070 Hb_000152_650 Hb_000152_650 Hb_104014_010--Hb_000152_650 Hb_010422_020 Hb_010422_020 Hb_104014_010--Hb_010422_020 Hb_001369_590 Hb_001369_590 Hb_104014_010--Hb_001369_590 Hb_005365_040 Hb_005365_040 Hb_104014_010--Hb_005365_040 Hb_001123_340--Hb_000282_010 Hb_001926_010 Hb_001926_010 Hb_001123_340--Hb_001926_010 Hb_089736_010 Hb_089736_010 Hb_001123_340--Hb_089736_010 Hb_000187_100 Hb_000187_100 Hb_001123_340--Hb_000187_100 Hb_000264_160 Hb_000264_160 Hb_001123_340--Hb_000264_160 Hb_000084_210 Hb_000084_210 Hb_002561_040--Hb_000084_210 Hb_011716_140 Hb_011716_140 Hb_002561_040--Hb_011716_140 Hb_000928_100 Hb_000928_100 Hb_002561_040--Hb_000928_100 Hb_002078_280 Hb_002078_280 Hb_002561_040--Hb_002078_280 Hb_000386_010 Hb_000386_010 Hb_002561_040--Hb_000386_010 Hb_001916_110 Hb_001916_110 Hb_002561_040--Hb_001916_110 Hb_005599_020 Hb_005599_020 Hb_065256_010--Hb_005599_020 Hb_034585_070 Hb_034585_070 Hb_065256_010--Hb_034585_070 Hb_065256_010--Hb_005888_060 Hb_000479_340 Hb_000479_340 Hb_065256_010--Hb_000479_340 Hb_103709_010 Hb_103709_010 Hb_065256_010--Hb_103709_010 Hb_005888_060--Hb_000386_010 Hb_005227_030 Hb_005227_030 Hb_005888_060--Hb_005227_030 Hb_005305_140 Hb_005305_140 Hb_005888_060--Hb_005305_140 Hb_005888_060--Hb_002561_040 Hb_007254_010 Hb_007254_010 Hb_005888_060--Hb_007254_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.4014 106.436 6.46783 0 0.0189399
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0176207 0 0.196275 28.3446

CAGE analysis