Hb_104014_010

Information

Type -
Description -
Location Contig104014: 6126-7836
Sequence    

Annotation

kegg
ID rcu:RCOM_1579680
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.23)
nr
ID XP_012066206.1
description PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L6J8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23785 PE=3 SV=1
Gene Ontology
ID GO:0005524
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_104014_010 0.0 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
2 Hb_000051_150 0.0801566224 - - hypothetical protein CICLE_v10003316mg [Citrus clementina]
3 Hb_001913_070 0.0817348986 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
4 Hb_000152_650 0.0882487908 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
5 Hb_010422_020 0.0890940664 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas]
6 Hb_001369_590 0.0992127958 transcription factor TF Family: MYB hypothetical protein POPTR_0015s14600g [Populus trichocarpa]
7 Hb_005365_040 0.0992566746 - - hypothetical protein JCGZ_15100 [Jatropha curcas]
8 Hb_002121_030 0.1007350905 - - Ribonuclease P protein subunit P38-related isoform 1 [Theobroma cacao]
9 Hb_000809_220 0.1015267282 - - PREDICTED: 3-ketodihydrosphingosine reductase [Jatropha curcas]
10 Hb_001983_040 0.1028718258 - - PREDICTED: uncharacterized protein LOC105644022 [Jatropha curcas]
11 Hb_054615_010 0.1029543512 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
12 Hb_046590_010 0.1034045641 - - Cycloeucalenol cycloisomerase, putative [Ricinus communis]
13 Hb_002918_170 0.104149973 - - PREDICTED: MACPF domain-containing protein NSL1 [Jatropha curcas]
14 Hb_003077_010 0.1047577348 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_033834_020 0.1051415291 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001123_340 0.1059986975 - - PREDICTED: uncharacterized protein LOC105123089 isoform X1 [Populus euphratica]
17 Hb_002499_050 0.106952017 - - receptor protein kinase, putative [Ricinus communis]
18 Hb_149985_030 0.1096200767 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
19 Hb_005511_080 0.1120361964 - - Protein MLO, putative [Ricinus communis]
20 Hb_001606_040 0.11464504 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]

Gene co-expression network

sample Hb_104014_010 Hb_104014_010 Hb_000051_150 Hb_000051_150 Hb_104014_010--Hb_000051_150 Hb_001913_070 Hb_001913_070 Hb_104014_010--Hb_001913_070 Hb_000152_650 Hb_000152_650 Hb_104014_010--Hb_000152_650 Hb_010422_020 Hb_010422_020 Hb_104014_010--Hb_010422_020 Hb_001369_590 Hb_001369_590 Hb_104014_010--Hb_001369_590 Hb_005365_040 Hb_005365_040 Hb_104014_010--Hb_005365_040 Hb_002121_030 Hb_002121_030 Hb_000051_150--Hb_002121_030 Hb_000809_220 Hb_000809_220 Hb_000051_150--Hb_000809_220 Hb_000051_150--Hb_005365_040 Hb_000051_150--Hb_010422_020 Hb_000051_150--Hb_001369_590 Hb_001913_070--Hb_010422_020 Hb_001983_040 Hb_001983_040 Hb_001913_070--Hb_001983_040 Hb_149985_030 Hb_149985_030 Hb_001913_070--Hb_149985_030 Hb_001913_070--Hb_000809_220 Hb_000349_170 Hb_000349_170 Hb_001913_070--Hb_000349_170 Hb_000152_650--Hb_002121_030 Hb_000264_160 Hb_000264_160 Hb_000152_650--Hb_000264_160 Hb_000152_650--Hb_001369_590 Hb_054615_010 Hb_054615_010 Hb_000152_650--Hb_054615_010 Hb_000152_650--Hb_005365_040 Hb_010422_020--Hb_001983_040 Hb_059429_010 Hb_059429_010 Hb_010422_020--Hb_059429_010 Hb_010422_020--Hb_000809_220 Hb_001369_590--Hb_005365_040 Hb_001369_590--Hb_002121_030 Hb_002499_050 Hb_002499_050 Hb_001369_590--Hb_002499_050 Hb_006620_030 Hb_006620_030 Hb_001369_590--Hb_006620_030 Hb_000084_210 Hb_000084_210 Hb_001369_590--Hb_000084_210 Hb_000187_100 Hb_000187_100 Hb_005365_040--Hb_000187_100 Hb_000160_260 Hb_000160_260 Hb_005365_040--Hb_000160_260 Hb_005365_040--Hb_002121_030 Hb_005365_040--Hb_000084_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.88245 48.0167 7.59983 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0368252 0 0 0.475108 11.7414

CAGE analysis