Hb_001913_070

Information

Type -
Description -
Location Contig1913: 28355-35711
Sequence    

Annotation

kegg
ID pop:POPTR_0010s21900g
description POPTRDRAFT_567499; hydrolase family protein
nr
ID XP_012073355.1
description PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
swissprot
ID Q9C942
description Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1
trembl
ID A0A067LNR6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06630 PE=4 SV=1
Gene Ontology
ID GO:0016787
description caffeoylshikimate esterase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19104: 35187-35587
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001913_070 0.0 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
2 Hb_010422_020 0.0812306594 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas]
3 Hb_104014_010 0.0817348986 - - PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Jatropha curcas]
4 Hb_001983_040 0.0827304364 - - PREDICTED: uncharacterized protein LOC105644022 [Jatropha curcas]
5 Hb_149985_030 0.085845886 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
6 Hb_000809_220 0.0906790951 - - PREDICTED: 3-ketodihydrosphingosine reductase [Jatropha curcas]
7 Hb_000349_170 0.0925209148 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
8 Hb_059429_010 0.0982151422 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
9 Hb_000049_030 0.0982732003 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000051_150 0.1028187561 - - hypothetical protein CICLE_v10003316mg [Citrus clementina]
11 Hb_004308_030 0.1106362754 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
12 Hb_005695_070 0.1157246785 - - Cysteine-rich RLK 29 [Theobroma cacao]
13 Hb_115962_010 0.1209345122 - - receptor serine/threonine kinase, putative [Ricinus communis]
14 Hb_010267_020 0.1219114087 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
15 Hb_022406_010 0.1242938936 - - UDP-glucosyltransferase, putative [Ricinus communis]
16 Hb_006501_080 0.1243338331 - - PREDICTED: uncharacterized protein LOC105637775 [Jatropha curcas]
17 Hb_009421_090 0.1294571967 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
18 Hb_002121_030 0.1314424493 - - Ribonuclease P protein subunit P38-related isoform 1 [Theobroma cacao]
19 Hb_001606_040 0.1323292127 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
20 Hb_000152_650 0.1326974211 - - trehalose-6-phosphate synthase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001913_070 Hb_001913_070 Hb_010422_020 Hb_010422_020 Hb_001913_070--Hb_010422_020 Hb_104014_010 Hb_104014_010 Hb_001913_070--Hb_104014_010 Hb_001983_040 Hb_001983_040 Hb_001913_070--Hb_001983_040 Hb_149985_030 Hb_149985_030 Hb_001913_070--Hb_149985_030 Hb_000809_220 Hb_000809_220 Hb_001913_070--Hb_000809_220 Hb_000349_170 Hb_000349_170 Hb_001913_070--Hb_000349_170 Hb_010422_020--Hb_001983_040 Hb_059429_010 Hb_059429_010 Hb_010422_020--Hb_059429_010 Hb_000051_150 Hb_000051_150 Hb_010422_020--Hb_000051_150 Hb_010422_020--Hb_104014_010 Hb_010422_020--Hb_000809_220 Hb_104014_010--Hb_000051_150 Hb_000152_650 Hb_000152_650 Hb_104014_010--Hb_000152_650 Hb_001369_590 Hb_001369_590 Hb_104014_010--Hb_001369_590 Hb_005365_040 Hb_005365_040 Hb_104014_010--Hb_005365_040 Hb_001983_040--Hb_059429_010 Hb_000049_030 Hb_000049_030 Hb_001983_040--Hb_000049_030 Hb_001983_040--Hb_000809_220 Hb_001983_040--Hb_000051_150 Hb_022406_010 Hb_022406_010 Hb_149985_030--Hb_022406_010 Hb_149985_030--Hb_000349_170 Hb_005695_070 Hb_005695_070 Hb_149985_030--Hb_005695_070 Hb_001606_040 Hb_001606_040 Hb_149985_030--Hb_001606_040 Hb_103709_010 Hb_103709_010 Hb_149985_030--Hb_103709_010 Hb_002121_030 Hb_002121_030 Hb_000809_220--Hb_002121_030 Hb_000809_220--Hb_000051_150 Hb_004308_030 Hb_004308_030 Hb_000809_220--Hb_004308_030 Hb_000349_170--Hb_005695_070 Hb_000349_170--Hb_022406_010 Hb_003767_030 Hb_003767_030 Hb_000349_170--Hb_003767_030 Hb_000388_040 Hb_000388_040 Hb_000349_170--Hb_000388_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.693477 4.13569 0.899623 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0444211 0.833381

CAGE analysis