Hb_183192_010

Information

Type -
Description -
Location Contig183192: 1-421
Sequence    

Annotation

kegg
ID pda:103701664
description thioredoxin reductase NTRC
nr
ID XP_011075337.1
description PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
swissprot
ID O22229
description NADPH-dependent thioredoxin reductase 3 OS=Arabidopsis thaliana GN=NTRC PE=1 SV=2
trembl
ID A0A067JQA4
description Thioredoxin reductase OS=Jatropha curcas GN=JCGZ_21105 PE=3 SV=1
Gene Ontology
ID GO:0009570
description thioredoxin reductase ntrc

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183192_010 0.0 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
2 Hb_009979_010 0.1209805738 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_004495_010 0.1561737971 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
4 Hb_001628_020 0.1595385969 - - receptor serine/threonine kinase, putative [Ricinus communis]
5 Hb_001369_670 0.170386556 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
6 Hb_029689_010 0.1732747908 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
7 Hb_012022_020 0.1831674905 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
8 Hb_001775_090 0.1848064686 - - hypothetical protein JCGZ_11262 [Jatropha curcas]
9 Hb_001141_200 0.1889138283 - - PREDICTED: LOW QUALITY PROTEIN: parafibromin [Prunus mume]
10 Hb_007163_080 0.1926092263 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
11 Hb_065755_020 0.1928365316 - - choline monooxygenase, putative [Ricinus communis]
12 Hb_001486_210 0.1933700414 - - -
13 Hb_002007_070 0.1977799995 - - PREDICTED: serrate RNA effector molecule homolog [Jatropha curcas]
14 Hb_000755_040 0.1988157293 - - early-responsive to dehydration family protein [Populus trichocarpa]
15 Hb_002965_070 0.2008084972 - - PREDICTED: extensin [Jatropha curcas]
16 Hb_000162_130 0.2021954987 - - conserved hypothetical protein [Ricinus communis]
17 Hb_074184_010 0.2023146552 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
18 Hb_000819_020 0.2034802868 - - hypothetical protein PRUPE_ppa020290mg, partial [Prunus persica]
19 Hb_001430_010 0.2061165672 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
20 Hb_008250_020 0.2083905848 - - PREDICTED: U-box domain-containing protein 15-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_183192_010 Hb_183192_010 Hb_009979_010 Hb_009979_010 Hb_183192_010--Hb_009979_010 Hb_004495_010 Hb_004495_010 Hb_183192_010--Hb_004495_010 Hb_001628_020 Hb_001628_020 Hb_183192_010--Hb_001628_020 Hb_001369_670 Hb_001369_670 Hb_183192_010--Hb_001369_670 Hb_029689_010 Hb_029689_010 Hb_183192_010--Hb_029689_010 Hb_012022_020 Hb_012022_020 Hb_183192_010--Hb_012022_020 Hb_009979_010--Hb_012022_020 Hb_004021_090 Hb_004021_090 Hb_009979_010--Hb_004021_090 Hb_009979_010--Hb_001628_020 Hb_001141_200 Hb_001141_200 Hb_009979_010--Hb_001141_200 Hb_001004_050 Hb_001004_050 Hb_009979_010--Hb_001004_050 Hb_000521_180 Hb_000521_180 Hb_004495_010--Hb_000521_180 Hb_123475_020 Hb_123475_020 Hb_004495_010--Hb_123475_020 Hb_065755_020 Hb_065755_020 Hb_004495_010--Hb_065755_020 Hb_074184_010 Hb_074184_010 Hb_004495_010--Hb_074184_010 Hb_004495_010--Hb_009979_010 Hb_001628_020--Hb_001141_200 Hb_010721_010 Hb_010721_010 Hb_001628_020--Hb_010721_010 Hb_002936_030 Hb_002936_030 Hb_001628_020--Hb_002936_030 Hb_007574_050 Hb_007574_050 Hb_001628_020--Hb_007574_050 Hb_000087_200 Hb_000087_200 Hb_001628_020--Hb_000087_200 Hb_005048_120 Hb_005048_120 Hb_001628_020--Hb_005048_120 Hb_000172_410 Hb_000172_410 Hb_001369_670--Hb_000172_410 Hb_003078_070 Hb_003078_070 Hb_001369_670--Hb_003078_070 Hb_160653_010 Hb_160653_010 Hb_001369_670--Hb_160653_010 Hb_003060_150 Hb_003060_150 Hb_001369_670--Hb_003060_150 Hb_004837_200 Hb_004837_200 Hb_001369_670--Hb_004837_200 Hb_121540_010 Hb_121540_010 Hb_001369_670--Hb_121540_010 Hb_000059_260 Hb_000059_260 Hb_029689_010--Hb_000059_260 Hb_002311_150 Hb_002311_150 Hb_029689_010--Hb_002311_150 Hb_029689_010--Hb_074184_010 Hb_007120_010 Hb_007120_010 Hb_029689_010--Hb_007120_010 Hb_033149_020 Hb_033149_020 Hb_029689_010--Hb_033149_020 Hb_017693_040 Hb_017693_040 Hb_012022_020--Hb_017693_040 Hb_001846_030 Hb_001846_030 Hb_012022_020--Hb_001846_030 Hb_000069_530 Hb_000069_530 Hb_012022_020--Hb_000069_530 Hb_032071_010 Hb_032071_010 Hb_012022_020--Hb_032071_010 Hb_120011_010 Hb_120011_010 Hb_012022_020--Hb_120011_010 Hb_077694_010 Hb_077694_010 Hb_012022_020--Hb_077694_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.8755 87.742 115.236 42.2633 1.2258 7.06132
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.581517 0 0 7.99021 3.19713

CAGE analysis