Hb_007120_010

Information

Type -
Description -
Location Contig7120: 10792-16537
Sequence    

Annotation

kegg
ID rcu:RCOM_0606780
description phosphatidylinositol n-acetylglucosaminyltransferase subunit p, putative
nr
ID XP_012073039.1
description PREDICTED: uncharacterized protein LOC105634737 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LMP1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06601 PE=4 SV=1
Gene Ontology
ID GO:0016740
description phosphatidylinositol n-acetylglucosaminyltransferase subunit

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55327: 10924-13123 , PASA_asmbl_55330: 14195-15998 , PASA_asmbl_55331: 16015-16771
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007120_010 0.0 - - PREDICTED: uncharacterized protein LOC105634737 [Jatropha curcas]
2 Hb_000373_250 0.0746642997 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
3 Hb_001989_060 0.1089285413 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105634562 isoform X2 [Jatropha curcas]
4 Hb_000805_040 0.1165285801 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
5 Hb_001863_270 0.1172416389 - - hypothetical protein JCGZ_15813 [Jatropha curcas]
6 Hb_000045_140 0.1259085753 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
7 Hb_002498_250 0.1264046785 - - 5'-adenylylsulfate reductase 1, chloroplast precursor, putative [Ricinus communis]
8 Hb_078901_010 0.1291480843 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
9 Hb_004712_160 0.131007277 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
10 Hb_033327_010 0.1329444829 - - SYM8 [Pisum sativum]
11 Hb_001405_060 0.1360193396 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
12 Hb_005282_010 0.1365084888 - - PREDICTED: probable xyloglucan glycosyltransferase 12 [Populus euphratica]
13 Hb_098160_010 0.1367700824 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
14 Hb_000284_180 0.1374160797 - - hypothetical protein EUGRSUZ_B01865 [Eucalyptus grandis]
15 Hb_002936_030 0.1394238065 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
16 Hb_002849_110 0.1398443834 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
17 Hb_002234_200 0.1423509812 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
18 Hb_000805_150 0.142664835 transcription factor TF Family: GRAS transcription factor, putative [Ricinus communis]
19 Hb_011360_090 0.1429413824 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]
20 Hb_000532_030 0.1466487862 - - PREDICTED: oxalate--CoA ligase-like [Jatropha curcas]

Gene co-expression network

sample Hb_007120_010 Hb_007120_010 Hb_000373_250 Hb_000373_250 Hb_007120_010--Hb_000373_250 Hb_001989_060 Hb_001989_060 Hb_007120_010--Hb_001989_060 Hb_000805_040 Hb_000805_040 Hb_007120_010--Hb_000805_040 Hb_001863_270 Hb_001863_270 Hb_007120_010--Hb_001863_270 Hb_000045_140 Hb_000045_140 Hb_007120_010--Hb_000045_140 Hb_002498_250 Hb_002498_250 Hb_007120_010--Hb_002498_250 Hb_005282_010 Hb_005282_010 Hb_000373_250--Hb_005282_010 Hb_000373_250--Hb_002498_250 Hb_000988_020 Hb_000988_020 Hb_000373_250--Hb_000988_020 Hb_002849_110 Hb_002849_110 Hb_000373_250--Hb_002849_110 Hb_001405_060 Hb_001405_060 Hb_000373_250--Hb_001405_060 Hb_000283_100 Hb_000283_100 Hb_001989_060--Hb_000283_100 Hb_010126_030 Hb_010126_030 Hb_001989_060--Hb_010126_030 Hb_011930_120 Hb_011930_120 Hb_001989_060--Hb_011930_120 Hb_004586_130 Hb_004586_130 Hb_001989_060--Hb_004586_130 Hb_000680_180 Hb_000680_180 Hb_001989_060--Hb_000680_180 Hb_000805_040--Hb_001863_270 Hb_011360_090 Hb_011360_090 Hb_000805_040--Hb_011360_090 Hb_000009_200 Hb_000009_200 Hb_000805_040--Hb_000009_200 Hb_000805_040--Hb_000373_250 Hb_000805_040--Hb_011930_120 Hb_001863_270--Hb_001989_060 Hb_001863_270--Hb_000373_250 Hb_001863_270--Hb_011360_090 Hb_002053_030 Hb_002053_030 Hb_001863_270--Hb_002053_030 Hb_181824_010 Hb_181824_010 Hb_000045_140--Hb_181824_010 Hb_000532_030 Hb_000532_030 Hb_000045_140--Hb_000532_030 Hb_000045_140--Hb_000283_100 Hb_000045_140--Hb_010126_030 Hb_000045_140--Hb_001989_060 Hb_094437_050 Hb_094437_050 Hb_002498_250--Hb_094437_050 Hb_005725_280 Hb_005725_280 Hb_002498_250--Hb_005725_280 Hb_004218_080 Hb_004218_080 Hb_002498_250--Hb_004218_080 Hb_002498_250--Hb_011930_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.880371 22.4411 9.29132 8.56855 0.595664 1.3782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.367267 0.758647 0.437295 0.840862 2.10482

CAGE analysis