Hb_001405_060

Information

Type -
Description -
Location Contig1405: 116482-117798
Sequence    

Annotation

kegg
ID rcu:RCOM_0909470
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012069743.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
swissprot
ID Q9XIW0
description CBL-interacting serine/threonine-protein kinase 7 OS=Arabidopsis thaliana GN=CIPK7 PE=1 SV=1
trembl
ID A0A067L867
description Non-specific serine/threonine protein kinase OS=Jatropha curcas GN=JCGZ_02262 PE=4 SV=1
Gene Ontology
ID GO:0004674
description cbl-interacting serine threonine-protein kinase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001405_060 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
2 Hb_005282_010 0.0553094222 - - PREDICTED: probable xyloglucan glycosyltransferase 12 [Populus euphratica]
3 Hb_002234_200 0.0739102758 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
4 Hb_098160_010 0.0936016993 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
5 Hb_002849_110 0.0948296412 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
6 Hb_000373_250 0.1158117017 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]
7 Hb_003633_150 0.1191448384 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
8 Hb_007574_050 0.1212472537 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
9 Hb_008948_110 0.1221731972 - - PREDICTED: peroxidase 25 [Jatropha curcas]
10 Hb_002936_030 0.1259648344 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
11 Hb_001247_160 0.1315628977 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
12 Hb_013607_010 0.1358126224 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA3 [Jatropha curcas]
13 Hb_007120_010 0.1360193396 - - PREDICTED: uncharacterized protein LOC105634737 [Jatropha curcas]
14 Hb_000567_110 0.1400081836 - - hypothetical protein JCGZ_21556 [Jatropha curcas]
15 Hb_004282_040 0.1403152999 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
16 Hb_005694_150 0.1409554563 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
17 Hb_002233_080 0.1421800649 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
18 Hb_009476_110 0.1424134806 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
19 Hb_000836_210 0.1440354015 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
20 Hb_001019_020 0.1446422203 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001405_060 Hb_001405_060 Hb_005282_010 Hb_005282_010 Hb_001405_060--Hb_005282_010 Hb_002234_200 Hb_002234_200 Hb_001405_060--Hb_002234_200 Hb_098160_010 Hb_098160_010 Hb_001405_060--Hb_098160_010 Hb_002849_110 Hb_002849_110 Hb_001405_060--Hb_002849_110 Hb_000373_250 Hb_000373_250 Hb_001405_060--Hb_000373_250 Hb_003633_150 Hb_003633_150 Hb_001405_060--Hb_003633_150 Hb_005282_010--Hb_002234_200 Hb_005282_010--Hb_000373_250 Hb_005282_010--Hb_003633_150 Hb_005282_010--Hb_002849_110 Hb_005282_010--Hb_098160_010 Hb_013607_010 Hb_013607_010 Hb_002234_200--Hb_013607_010 Hb_000363_110 Hb_000363_110 Hb_002234_200--Hb_000363_110 Hb_008948_110 Hb_008948_110 Hb_002234_200--Hb_008948_110 Hb_002234_200--Hb_098160_010 Hb_007574_050 Hb_007574_050 Hb_098160_010--Hb_007574_050 Hb_098160_010--Hb_000363_110 Hb_001898_010 Hb_001898_010 Hb_098160_010--Hb_001898_010 Hb_000836_210 Hb_000836_210 Hb_002849_110--Hb_000836_210 Hb_002849_110--Hb_000373_250 Hb_000087_100 Hb_000087_100 Hb_002849_110--Hb_000087_100 Hb_004282_040 Hb_004282_040 Hb_002849_110--Hb_004282_040 Hb_007120_010 Hb_007120_010 Hb_000373_250--Hb_007120_010 Hb_002498_250 Hb_002498_250 Hb_000373_250--Hb_002498_250 Hb_000988_020 Hb_000988_020 Hb_000373_250--Hb_000988_020 Hb_009476_110 Hb_009476_110 Hb_003633_150--Hb_009476_110 Hb_001247_160 Hb_001247_160 Hb_003633_150--Hb_001247_160 Hb_182970_010 Hb_182970_010 Hb_003633_150--Hb_182970_010 Hb_000567_110 Hb_000567_110 Hb_003633_150--Hb_000567_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.34272 60.5011 21.9894 32.3444 1.07037 1.27192
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.653976 0.285811 0.640891 5.80681 8.32163

CAGE analysis