Hb_000059_260

Information

Type -
Description -
Location Contig59: 260166-261708
Sequence    

Annotation

kegg
ID rcu:RCOM_1502930
description Peroxidase 60 precursor, putative (EC:1.11.1.7)
nr
ID XP_012090537.1
description PREDICTED: LOW QUALITY PROTEIN: peroxidase 60 [Jatropha curcas]
swissprot
ID Q9FMR0
description Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1
trembl
ID B9RA28
description Peroxidase OS=Ricinus communis GN=RCOM_1502930 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 60

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000059_260 0.0 - - PREDICTED: LOW QUALITY PROTEIN: peroxidase 60 [Jatropha curcas]
2 Hb_029689_010 0.132679465 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
3 Hb_010964_010 0.1363087072 - - -
4 Hb_002960_100 0.139719304 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
5 Hb_000819_040 0.1484470252 - - ATP binding protein, putative [Ricinus communis]
6 Hb_001310_010 0.1493364512 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
7 Hb_181810_010 0.150252715 - - hypothetical protein JCGZ_14167 [Jatropha curcas]
8 Hb_003375_080 0.152770513 - - PREDICTED: uncharacterized protein LOC105643382 isoform X1 [Jatropha curcas]
9 Hb_006907_020 0.1581402573 - - 1-amino-cyclopropane-1-carboxylic acid oxidase 3 [Manihot esculenta]
10 Hb_000451_040 0.1601829536 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001989_060 0.1610449941 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105634562 isoform X2 [Jatropha curcas]
12 Hb_000284_180 0.1618134979 - - hypothetical protein EUGRSUZ_B01865 [Eucalyptus grandis]
13 Hb_010126_030 0.1639473171 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X1 [Jatropha curcas]
14 Hb_001999_170 0.1642158449 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
15 Hb_008948_110 0.1686256318 - - PREDICTED: peroxidase 25 [Jatropha curcas]
16 Hb_002936_030 0.1714314409 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
17 Hb_000780_110 0.1746304909 - - cation-transporting atpase plant, putative [Ricinus communis]
18 Hb_000172_410 0.1750614316 - - metal ion binding protein, putative [Ricinus communis]
19 Hb_077995_010 0.1784465614 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
20 Hb_000465_100 0.1792767779 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_000059_260 Hb_000059_260 Hb_029689_010 Hb_029689_010 Hb_000059_260--Hb_029689_010 Hb_010964_010 Hb_010964_010 Hb_000059_260--Hb_010964_010 Hb_002960_100 Hb_002960_100 Hb_000059_260--Hb_002960_100 Hb_000819_040 Hb_000819_040 Hb_000059_260--Hb_000819_040 Hb_001310_010 Hb_001310_010 Hb_000059_260--Hb_001310_010 Hb_181810_010 Hb_181810_010 Hb_000059_260--Hb_181810_010 Hb_002311_150 Hb_002311_150 Hb_029689_010--Hb_002311_150 Hb_183192_010 Hb_183192_010 Hb_029689_010--Hb_183192_010 Hb_074184_010 Hb_074184_010 Hb_029689_010--Hb_074184_010 Hb_007120_010 Hb_007120_010 Hb_029689_010--Hb_007120_010 Hb_033149_020 Hb_033149_020 Hb_029689_010--Hb_033149_020 Hb_001999_170 Hb_001999_170 Hb_010964_010--Hb_001999_170 Hb_007858_020 Hb_007858_020 Hb_010964_010--Hb_007858_020 Hb_000808_090 Hb_000808_090 Hb_010964_010--Hb_000808_090 Hb_010964_010--Hb_001310_010 Hb_000627_130 Hb_000627_130 Hb_010964_010--Hb_000627_130 Hb_001619_140 Hb_001619_140 Hb_010964_010--Hb_001619_140 Hb_002960_100--Hb_001310_010 Hb_010126_030 Hb_010126_030 Hb_002960_100--Hb_010126_030 Hb_002960_100--Hb_001999_170 Hb_061908_030 Hb_061908_030 Hb_002960_100--Hb_061908_030 Hb_004612_020 Hb_004612_020 Hb_002960_100--Hb_004612_020 Hb_000045_140 Hb_000045_140 Hb_000819_040--Hb_000045_140 Hb_000230_210 Hb_000230_210 Hb_000819_040--Hb_000230_210 Hb_181824_010 Hb_181824_010 Hb_000819_040--Hb_181824_010 Hb_000340_060 Hb_000340_060 Hb_000819_040--Hb_000340_060 Hb_000819_040--Hb_181810_010 Hb_003375_080 Hb_003375_080 Hb_000819_040--Hb_003375_080 Hb_001310_010--Hb_001999_170 Hb_120011_010 Hb_120011_010 Hb_001310_010--Hb_120011_010 Hb_001310_010--Hb_004612_020 Hb_164146_020 Hb_164146_020 Hb_001310_010--Hb_164146_020 Hb_181810_010--Hb_010964_010 Hb_004032_220 Hb_004032_220 Hb_181810_010--Hb_004032_220 Hb_181810_010--Hb_000340_060 Hb_181810_010--Hb_002960_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0448024 0.662228 0.380748 0.151588 0.0209975 0.0197353
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0162341 0.0825044

CAGE analysis