Hb_061908_030

Information

Type -
Description -
Location Contig61908: 8097-10070
Sequence    

Annotation

kegg
ID pop:POPTR_0004s20610g
description hypothetical protein
nr
ID XP_012065625.1
description PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
swissprot
ID Q9LRR5
description Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1
trembl
ID A0A067LHA1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16876 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061908_030 0.0 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
2 Hb_010126_030 0.1005497664 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X1 [Jatropha curcas]
3 Hb_002151_130 0.1207383994 - - 12-oxophytodienoate reductase [Hevea brasiliensis]
4 Hb_000451_040 0.1260068387 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000984_290 0.1276731942 - - PREDICTED: putative lipase ROG1 isoform X2 [Jatropha curcas]
6 Hb_004586_130 0.131046648 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002960_100 0.1358574899 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
8 Hb_001989_060 0.1365703393 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105634562 isoform X2 [Jatropha curcas]
9 Hb_011930_120 0.1382100978 - - PREDICTED: uncharacterized protein LOC105649794 isoform X1 [Jatropha curcas]
10 Hb_000086_620 0.1389196597 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
11 Hb_001999_170 0.1390565618 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
12 Hb_001310_010 0.1416033218 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
13 Hb_089114_010 0.142637984 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
14 Hb_000283_100 0.1436480787 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Jatropha curcas]
15 Hb_000680_180 0.1454097025 - - hypothetical protein JCGZ_15248 [Jatropha curcas]
16 Hb_124677_020 0.1474306535 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
17 Hb_000336_060 0.1526576736 - - hypothetical protein JCGZ_26632 [Jatropha curcas]
18 Hb_008020_020 0.1579673517 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Jatropha curcas]
19 Hb_002007_070 0.1614111633 - - PREDICTED: serrate RNA effector molecule homolog [Jatropha curcas]
20 Hb_002876_070 0.1625567874 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]

Gene co-expression network

sample Hb_061908_030 Hb_061908_030 Hb_010126_030 Hb_010126_030 Hb_061908_030--Hb_010126_030 Hb_002151_130 Hb_002151_130 Hb_061908_030--Hb_002151_130 Hb_000451_040 Hb_000451_040 Hb_061908_030--Hb_000451_040 Hb_000984_290 Hb_000984_290 Hb_061908_030--Hb_000984_290 Hb_004586_130 Hb_004586_130 Hb_061908_030--Hb_004586_130 Hb_002960_100 Hb_002960_100 Hb_061908_030--Hb_002960_100 Hb_000283_100 Hb_000283_100 Hb_010126_030--Hb_000283_100 Hb_001989_060 Hb_001989_060 Hb_010126_030--Hb_001989_060 Hb_010126_030--Hb_004586_130 Hb_000680_180 Hb_000680_180 Hb_010126_030--Hb_000680_180 Hb_001999_170 Hb_001999_170 Hb_010126_030--Hb_001999_170 Hb_002151_130--Hb_004586_130 Hb_124677_020 Hb_124677_020 Hb_002151_130--Hb_124677_020 Hb_002151_130--Hb_000984_290 Hb_002151_130--Hb_010126_030 Hb_002876_070 Hb_002876_070 Hb_002151_130--Hb_002876_070 Hb_000451_040--Hb_000984_290 Hb_000451_040--Hb_010126_030 Hb_000451_040--Hb_001989_060 Hb_000451_040--Hb_004586_130 Hb_001898_010 Hb_001898_010 Hb_000451_040--Hb_001898_010 Hb_000172_410 Hb_000172_410 Hb_000984_290--Hb_000172_410 Hb_003078_070 Hb_003078_070 Hb_000984_290--Hb_003078_070 Hb_000984_290--Hb_124677_020 Hb_004586_130--Hb_000283_100 Hb_000221_230 Hb_000221_230 Hb_004586_130--Hb_000221_230 Hb_004586_130--Hb_002876_070 Hb_004586_130--Hb_001989_060 Hb_001310_010 Hb_001310_010 Hb_002960_100--Hb_001310_010 Hb_002960_100--Hb_010126_030 Hb_002960_100--Hb_001999_170 Hb_000059_260 Hb_000059_260 Hb_002960_100--Hb_000059_260 Hb_004612_020 Hb_004612_020 Hb_002960_100--Hb_004612_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.309398 8.0588 6.77263 1.39417 0.231281 0.330439
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.274946 0.401665 0.0575559 0.593808 0.832506

CAGE analysis