Hb_000984_290

Information

Type -
Description -
Location Contig984: 291770-296295
Sequence    

Annotation

kegg
ID rcu:RCOM_1585050
description catalytic, putative
nr
ID XP_012068134.1
description PREDICTED: putative lipase ROG1 isoform X2 [Jatropha curcas]
swissprot
ID Q08448
description Putative lipase YOR059C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR059C PE=1 SV=1
trembl
ID B9R6T0
description Catalytic, putative OS=Ricinus communis GN=RCOM_1585050 PE=4 SV=1
Gene Ontology
ID GO:0016787
description lipase rog1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64590: 291618-295974 , PASA_asmbl_64591: 293322-293445 , PASA_asmbl_64592: 296116-296219
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_290 0.0 - - PREDICTED: putative lipase ROG1 isoform X2 [Jatropha curcas]
2 Hb_000451_040 0.0997847444 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002151_130 0.1201210984 - - 12-oxophytodienoate reductase [Hevea brasiliensis]
4 Hb_061908_030 0.1276731942 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
5 Hb_000172_410 0.1301699476 - - metal ion binding protein, putative [Ricinus communis]
6 Hb_003078_070 0.1318005681 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290 [Jatropha curcas]
7 Hb_124677_020 0.1328895534 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
8 Hb_000336_060 0.1335508457 - - hypothetical protein JCGZ_26632 [Jatropha curcas]
9 Hb_010126_030 0.134378595 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X1 [Jatropha curcas]
10 Hb_002007_070 0.1360554242 - - PREDICTED: serrate RNA effector molecule homolog [Jatropha curcas]
11 Hb_001623_410 0.1402743707 - - PREDICTED: beta-amylase 1, chloroplastic [Jatropha curcas]
12 Hb_002936_030 0.1404883297 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
13 Hb_004586_130 0.1439469669 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001369_670 0.1460431108 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
15 Hb_031108_010 0.1473767954 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
16 Hb_000359_260 0.1491446765 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
17 Hb_001247_160 0.149991949 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
18 Hb_000680_180 0.1505855452 - - hypothetical protein JCGZ_15248 [Jatropha curcas]
19 Hb_000454_080 0.151139428 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
20 Hb_000985_140 0.1513644523 - - PREDICTED: uncharacterized protein LOC105643381 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_000984_290 Hb_000984_290 Hb_000451_040 Hb_000451_040 Hb_000984_290--Hb_000451_040 Hb_002151_130 Hb_002151_130 Hb_000984_290--Hb_002151_130 Hb_061908_030 Hb_061908_030 Hb_000984_290--Hb_061908_030 Hb_000172_410 Hb_000172_410 Hb_000984_290--Hb_000172_410 Hb_003078_070 Hb_003078_070 Hb_000984_290--Hb_003078_070 Hb_124677_020 Hb_124677_020 Hb_000984_290--Hb_124677_020 Hb_000451_040--Hb_061908_030 Hb_010126_030 Hb_010126_030 Hb_000451_040--Hb_010126_030 Hb_001989_060 Hb_001989_060 Hb_000451_040--Hb_001989_060 Hb_004586_130 Hb_004586_130 Hb_000451_040--Hb_004586_130 Hb_001898_010 Hb_001898_010 Hb_000451_040--Hb_001898_010 Hb_002151_130--Hb_004586_130 Hb_002151_130--Hb_124677_020 Hb_002151_130--Hb_061908_030 Hb_002151_130--Hb_010126_030 Hb_002876_070 Hb_002876_070 Hb_002151_130--Hb_002876_070 Hb_061908_030--Hb_010126_030 Hb_061908_030--Hb_004586_130 Hb_002960_100 Hb_002960_100 Hb_061908_030--Hb_002960_100 Hb_000172_410--Hb_003078_070 Hb_001369_670 Hb_001369_670 Hb_000172_410--Hb_001369_670 Hb_121540_010 Hb_121540_010 Hb_000172_410--Hb_121540_010 Hb_002400_020 Hb_002400_020 Hb_000172_410--Hb_002400_020 Hb_004109_240 Hb_004109_240 Hb_000172_410--Hb_004109_240 Hb_001660_080 Hb_001660_080 Hb_000172_410--Hb_001660_080 Hb_000985_140 Hb_000985_140 Hb_003078_070--Hb_000985_140 Hb_021254_020 Hb_021254_020 Hb_003078_070--Hb_021254_020 Hb_004837_200 Hb_004837_200 Hb_003078_070--Hb_004837_200 Hb_000071_090 Hb_000071_090 Hb_003078_070--Hb_000071_090 Hb_000836_420 Hb_000836_420 Hb_003078_070--Hb_000836_420 Hb_000336_060 Hb_000336_060 Hb_124677_020--Hb_000336_060 Hb_000260_300 Hb_000260_300 Hb_124677_020--Hb_000260_300 Hb_022137_020 Hb_022137_020 Hb_124677_020--Hb_022137_020 Hb_001999_170 Hb_001999_170 Hb_124677_020--Hb_001999_170 Hb_155946_030 Hb_155946_030 Hb_124677_020--Hb_155946_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.244263 26.731 24.7982 9.81972 1.13971 0.718172
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.656845 0.568419 0.533056 2.82756 2.64363

CAGE analysis