Hb_000336_060

Information

Type -
Description -
Location Contig336: 119281-122317
Sequence    

Annotation

kegg
ID rcu:RCOM_1636080
description 2,4-dienoyl-CoA reductase, putative (EC:1.1.1.100)
nr
ID KDP23890.1
description hypothetical protein JCGZ_26632 [Jatropha curcas]
swissprot
ID P51831
description 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3
trembl
ID A0A067JV67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26632 PE=3 SV=1
Gene Ontology
ID GO:0004316
description carbonyl reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35153: 119105-122179
cDNA
(Sanger)
(ID:Location)		 007_H13.ab1: 119105-120091

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000336_060 0.0 - - hypothetical protein JCGZ_26632 [Jatropha curcas]
2 Hb_124677_020 0.084028484 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
3 Hb_001999_170 0.1051330739 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
4 Hb_010126_030 0.1146337481 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 86 isoform X1 [Jatropha curcas]
5 Hb_000283_100 0.123811639 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Jatropha curcas]
6 Hb_000984_290 0.1335508457 - - PREDICTED: putative lipase ROG1 isoform X2 [Jatropha curcas]
7 Hb_022137_020 0.1378845324 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
8 Hb_000086_620 0.1383195421 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
9 Hb_001310_010 0.1429384913 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
10 Hb_000260_300 0.1439901174 - - calcium binding protein/cast, putative [Ricinus communis]
11 Hb_031108_010 0.1447223008 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
12 Hb_000451_040 0.1481030978 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000808_090 0.1486840944 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
14 Hb_002151_130 0.1519724256 - - 12-oxophytodienoate reductase [Hevea brasiliensis]
15 Hb_000045_140 0.152052126 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
16 Hb_002007_070 0.1522962041 - - PREDICTED: serrate RNA effector molecule homolog [Jatropha curcas]
17 Hb_061908_030 0.1526576736 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
18 Hb_001989_060 0.1539108324 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105634562 isoform X2 [Jatropha curcas]
19 Hb_004586_130 0.1546301655 - - conserved hypothetical protein [Ricinus communis]
20 Hb_155946_030 0.1556895388 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]

Gene co-expression network

sample Hb_000336_060 Hb_000336_060 Hb_124677_020 Hb_124677_020 Hb_000336_060--Hb_124677_020 Hb_001999_170 Hb_001999_170 Hb_000336_060--Hb_001999_170 Hb_010126_030 Hb_010126_030 Hb_000336_060--Hb_010126_030 Hb_000283_100 Hb_000283_100 Hb_000336_060--Hb_000283_100 Hb_000984_290 Hb_000984_290 Hb_000336_060--Hb_000984_290 Hb_022137_020 Hb_022137_020 Hb_000336_060--Hb_022137_020 Hb_000260_300 Hb_000260_300 Hb_124677_020--Hb_000260_300 Hb_002151_130 Hb_002151_130 Hb_124677_020--Hb_002151_130 Hb_124677_020--Hb_022137_020 Hb_124677_020--Hb_001999_170 Hb_155946_030 Hb_155946_030 Hb_124677_020--Hb_155946_030 Hb_001310_010 Hb_001310_010 Hb_001999_170--Hb_001310_010 Hb_010964_010 Hb_010964_010 Hb_001999_170--Hb_010964_010 Hb_001999_170--Hb_010126_030 Hb_005054_330 Hb_005054_330 Hb_001999_170--Hb_005054_330 Hb_007858_020 Hb_007858_020 Hb_001999_170--Hb_007858_020 Hb_010126_030--Hb_000283_100 Hb_001989_060 Hb_001989_060 Hb_010126_030--Hb_001989_060 Hb_004586_130 Hb_004586_130 Hb_010126_030--Hb_004586_130 Hb_061908_030 Hb_061908_030 Hb_010126_030--Hb_061908_030 Hb_000680_180 Hb_000680_180 Hb_010126_030--Hb_000680_180 Hb_000283_100--Hb_001989_060 Hb_000283_100--Hb_004586_130 Hb_000045_140 Hb_000045_140 Hb_000283_100--Hb_000045_140 Hb_000283_100--Hb_000680_180 Hb_000451_040 Hb_000451_040 Hb_000984_290--Hb_000451_040 Hb_000984_290--Hb_002151_130 Hb_000984_290--Hb_061908_030 Hb_000172_410 Hb_000172_410 Hb_000984_290--Hb_000172_410 Hb_003078_070 Hb_003078_070 Hb_000984_290--Hb_003078_070 Hb_000984_290--Hb_124677_020 Hb_007894_020 Hb_007894_020 Hb_022137_020--Hb_007894_020 Hb_101058_020 Hb_101058_020 Hb_022137_020--Hb_101058_020 Hb_158926_010 Hb_158926_010 Hb_022137_020--Hb_158926_010 Hb_002542_030 Hb_002542_030 Hb_022137_020--Hb_002542_030 Hb_022137_020--Hb_001999_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.656821 120.78 79.1826 29.7479 0.631386 1.27888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.81224 4.69231 5.41277 4.70289 6.57416

CAGE analysis