Hb_000819_040

Information

Type -
Description -
Location Contig819: 81148-83463
Sequence    

Annotation

kegg
ID rcu:RCOM_0576160
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_002531799.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID O65238
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2
trembl
ID B9T0N0
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_0576160 PE=3 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000819_040 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_000045_140 0.132252736 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
3 Hb_000230_210 0.1370463324 - - PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]
4 Hb_181824_010 0.1404303452 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
5 Hb_000340_060 0.1406925878 - - conserved hypothetical protein [Ricinus communis]
6 Hb_181810_010 0.1412104889 - - hypothetical protein JCGZ_14167 [Jatropha curcas]
7 Hb_003375_080 0.1461504098 - - PREDICTED: uncharacterized protein LOC105643382 isoform X1 [Jatropha curcas]
8 Hb_010964_010 0.1465247706 - - -
9 Hb_001846_040 0.1476386518 - - cytochrome P450, putative [Ricinus communis]
10 Hb_000059_260 0.1484470252 - - PREDICTED: LOW QUALITY PROTEIN: peroxidase 60 [Jatropha curcas]
11 Hb_016404_010 0.1486474023 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
12 Hb_000284_180 0.1539661583 - - hypothetical protein EUGRSUZ_B01865 [Eucalyptus grandis]
13 Hb_011287_020 0.1540899068 - - ATP binding protein, putative [Ricinus communis]
14 Hb_012264_010 0.1556752774 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
15 Hb_001999_170 0.160532156 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
16 Hb_185080_010 0.1624877633 - - -
17 Hb_029622_080 0.1649042643 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
18 Hb_005568_060 0.1672307572 - - PREDICTED: mitogen-activated protein kinase 3 [Jatropha curcas]
19 Hb_001257_040 0.1677683251 - - PREDICTED: uncharacterized protein LOC105640055 [Jatropha curcas]
20 Hb_010589_130 0.1681137868 - - PREDICTED: uncharacterized protein LOC104884346 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_000819_040 Hb_000819_040 Hb_000045_140 Hb_000045_140 Hb_000819_040--Hb_000045_140 Hb_000230_210 Hb_000230_210 Hb_000819_040--Hb_000230_210 Hb_181824_010 Hb_181824_010 Hb_000819_040--Hb_181824_010 Hb_000340_060 Hb_000340_060 Hb_000819_040--Hb_000340_060 Hb_181810_010 Hb_181810_010 Hb_000819_040--Hb_181810_010 Hb_003375_080 Hb_003375_080 Hb_000819_040--Hb_003375_080 Hb_000045_140--Hb_181824_010 Hb_000532_030 Hb_000532_030 Hb_000045_140--Hb_000532_030 Hb_000283_100 Hb_000283_100 Hb_000045_140--Hb_000283_100 Hb_010126_030 Hb_010126_030 Hb_000045_140--Hb_010126_030 Hb_001989_060 Hb_001989_060 Hb_000045_140--Hb_001989_060 Hb_007120_010 Hb_007120_010 Hb_000045_140--Hb_007120_010 Hb_000016_220 Hb_000016_220 Hb_000230_210--Hb_000016_220 Hb_005618_020 Hb_005618_020 Hb_000230_210--Hb_005618_020 Hb_022768_010 Hb_022768_010 Hb_000230_210--Hb_022768_010 Hb_002849_030 Hb_002849_030 Hb_000230_210--Hb_002849_030 Hb_034132_010 Hb_034132_010 Hb_000230_210--Hb_034132_010 Hb_106810_010 Hb_106810_010 Hb_000230_210--Hb_106810_010 Hb_005568_060 Hb_005568_060 Hb_181824_010--Hb_005568_060 Hb_033149_020 Hb_033149_020 Hb_181824_010--Hb_033149_020 Hb_001846_040 Hb_001846_040 Hb_181824_010--Hb_001846_040 Hb_016404_010 Hb_016404_010 Hb_181824_010--Hb_016404_010 Hb_138628_010 Hb_138628_010 Hb_181824_010--Hb_138628_010 Hb_001257_040 Hb_001257_040 Hb_000340_060--Hb_001257_040 Hb_000836_310 Hb_000836_310 Hb_000340_060--Hb_000836_310 Hb_004032_220 Hb_004032_220 Hb_000340_060--Hb_004032_220 Hb_008143_020 Hb_008143_020 Hb_000340_060--Hb_008143_020 Hb_000127_220 Hb_000127_220 Hb_000340_060--Hb_000127_220 Hb_007858_020 Hb_007858_020 Hb_000340_060--Hb_007858_020 Hb_010964_010 Hb_010964_010 Hb_181810_010--Hb_010964_010 Hb_181810_010--Hb_004032_220 Hb_181810_010--Hb_000340_060 Hb_000059_260 Hb_000059_260 Hb_181810_010--Hb_000059_260 Hb_002960_100 Hb_002960_100 Hb_181810_010--Hb_002960_100 Hb_185080_010 Hb_185080_010 Hb_003375_080--Hb_185080_010 Hb_001004_010 Hb_001004_010 Hb_003375_080--Hb_001004_010 Hb_010589_130 Hb_010589_130 Hb_003375_080--Hb_010589_130 Hb_078901_010 Hb_078901_010 Hb_003375_080--Hb_078901_010 Hb_009476_010 Hb_009476_010 Hb_003375_080--Hb_009476_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.68834 25.26 9.12973 4.24198 0.37011 0.510748
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.124183 0.0488567 0 0.297827 0.586386

CAGE analysis