Hb_001257_040

Information

Type -
Description -
Location Contig1257: 63243-63938
Sequence    

Annotation

kegg
ID cic:CICLE_v10029214mg
description hypothetical protein
nr
ID XP_012079653.1
description PREDICTED: uncharacterized protein LOC105640055 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6B0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15218 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001257_040 0.0 - - PREDICTED: uncharacterized protein LOC105640055 [Jatropha curcas]
2 Hb_004586_120 0.0674755822 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
3 Hb_000032_150 0.0690639767 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
4 Hb_000422_050 0.0754525694 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
5 Hb_000322_020 0.084482719 - - PREDICTED: uncharacterized protein LOC105637914 [Jatropha curcas]
6 Hb_124953_010 0.0875401447 - - hypothetical protein RCOM_1314600 [Ricinus communis]
7 Hb_004032_220 0.0891304599 - - Calmodulin, putative [Ricinus communis]
8 Hb_034642_010 0.0920114719 - - PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
9 Hb_000340_060 0.0929584116 - - conserved hypothetical protein [Ricinus communis]
10 Hb_027506_060 0.0932175322 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
11 Hb_000571_030 0.0984700204 - - ammonium transporter, putative [Ricinus communis]
12 Hb_007858_020 0.0991735886 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
13 Hb_005618_020 0.0997969909 - - hypothetical protein RCOM_1342750 [Ricinus communis]
14 Hb_047955_010 0.1007140152 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
15 Hb_029622_080 0.1015843129 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
16 Hb_000836_310 0.1020910891 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 30 [Jatropha curcas]
17 Hb_125201_010 0.1072318807 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
18 Hb_000656_350 0.1102141074 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
19 Hb_032260_100 0.1105507319 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
20 Hb_005248_020 0.1105755297 - - hypothetical protein JCGZ_23770 [Jatropha curcas]

Gene co-expression network

sample Hb_001257_040 Hb_001257_040 Hb_004586_120 Hb_004586_120 Hb_001257_040--Hb_004586_120 Hb_000032_150 Hb_000032_150 Hb_001257_040--Hb_000032_150 Hb_000422_050 Hb_000422_050 Hb_001257_040--Hb_000422_050 Hb_000322_020 Hb_000322_020 Hb_001257_040--Hb_000322_020 Hb_124953_010 Hb_124953_010 Hb_001257_040--Hb_124953_010 Hb_004032_220 Hb_004032_220 Hb_001257_040--Hb_004032_220 Hb_004586_120--Hb_000322_020 Hb_125201_010 Hb_125201_010 Hb_004586_120--Hb_125201_010 Hb_004586_120--Hb_000422_050 Hb_005618_020 Hb_005618_020 Hb_004586_120--Hb_005618_020 Hb_001477_080 Hb_001477_080 Hb_004586_120--Hb_001477_080 Hb_047955_010 Hb_047955_010 Hb_000032_150--Hb_047955_010 Hb_000032_150--Hb_124953_010 Hb_003207_230 Hb_003207_230 Hb_000032_150--Hb_003207_230 Hb_007858_020 Hb_007858_020 Hb_000032_150--Hb_007858_020 Hb_000032_150--Hb_004032_220 Hb_000422_050--Hb_000322_020 Hb_002849_030 Hb_002849_030 Hb_000422_050--Hb_002849_030 Hb_000127_220 Hb_000127_220 Hb_000422_050--Hb_000127_220 Hb_012496_010 Hb_012496_010 Hb_000422_050--Hb_012496_010 Hb_000322_020--Hb_002849_030 Hb_000347_360 Hb_000347_360 Hb_000322_020--Hb_000347_360 Hb_000529_050 Hb_000529_050 Hb_000322_020--Hb_000529_050 Hb_124953_010--Hb_003207_230 Hb_124953_010--Hb_007858_020 Hb_005054_330 Hb_005054_330 Hb_124953_010--Hb_005054_330 Hb_124953_010--Hb_047955_010 Hb_124953_010--Hb_004032_220 Hb_004032_220--Hb_007858_020 Hb_000836_310 Hb_000836_310 Hb_004032_220--Hb_000836_310 Hb_004032_220--Hb_005054_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.204262 108.801 37.1965 19.1325 0.132558 0.109108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.326214 0.384671 0.457291 0.234828 3.29442

CAGE analysis