Hb_000529_050

Information

Type -
Description -
Location Contig529: 74905-75882
Sequence    

Annotation

kegg
ID rcu:RCOM_0070090
description mitochondrial dicarboxylate carrier protein, putative
nr
ID XP_012081649.1
description PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
swissprot
ID Q9SB52
description Mitochondrial uncoupling protein 4 OS=Arabidopsis thaliana GN=PUMP4 PE=2 SV=1
trembl
ID A0A067K0M9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18686 PE=3 SV=1
Gene Ontology
ID GO:0016021
description mitochondrial uncoupling protein 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000529_050 0.0 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
2 Hb_000313_190 0.0417153948 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
3 Hb_001477_080 0.0694226766 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
4 Hb_000221_280 0.0815008039 - - PREDICTED: protein EXORDIUM-like [Populus euphratica]
5 Hb_004586_120 0.0905531759 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
6 Hb_000322_020 0.0917771064 - - PREDICTED: uncharacterized protein LOC105637914 [Jatropha curcas]
7 Hb_032260_100 0.0928253064 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
8 Hb_004242_160 0.0930348433 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
9 Hb_003071_040 0.1023698648 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
10 Hb_000731_020 0.1039039196 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
11 Hb_029622_080 0.1047337914 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
12 Hb_002922_010 0.1055100656 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
13 Hb_001098_020 0.1088697592 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
14 Hb_125201_010 0.1126023136 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
15 Hb_011287_020 0.1137686466 - - ATP binding protein, putative [Ricinus communis]
16 Hb_116349_090 0.1163264091 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
17 Hb_007441_150 0.1194084806 - - Ankyrin repeat family protein [Theobroma cacao]
18 Hb_000656_350 0.1196182455 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
19 Hb_001213_140 0.1202288466 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
20 Hb_006648_030 0.1255464398 - - Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus communis]

Gene co-expression network

sample Hb_000529_050 Hb_000529_050 Hb_000313_190 Hb_000313_190 Hb_000529_050--Hb_000313_190 Hb_001477_080 Hb_001477_080 Hb_000529_050--Hb_001477_080 Hb_000221_280 Hb_000221_280 Hb_000529_050--Hb_000221_280 Hb_004586_120 Hb_004586_120 Hb_000529_050--Hb_004586_120 Hb_000322_020 Hb_000322_020 Hb_000529_050--Hb_000322_020 Hb_032260_100 Hb_032260_100 Hb_000529_050--Hb_032260_100 Hb_000313_190--Hb_001477_080 Hb_000313_190--Hb_000221_280 Hb_000731_020 Hb_000731_020 Hb_000313_190--Hb_000731_020 Hb_003071_040 Hb_003071_040 Hb_000313_190--Hb_003071_040 Hb_004242_160 Hb_004242_160 Hb_000313_190--Hb_004242_160 Hb_001477_080--Hb_004242_160 Hb_002922_010 Hb_002922_010 Hb_001477_080--Hb_002922_010 Hb_001477_080--Hb_004586_120 Hb_001477_080--Hb_000322_020 Hb_000221_280--Hb_000731_020 Hb_001213_140 Hb_001213_140 Hb_000221_280--Hb_001213_140 Hb_029622_080 Hb_029622_080 Hb_000221_280--Hb_029622_080 Hb_000221_280--Hb_003071_040 Hb_004586_120--Hb_000322_020 Hb_001257_040 Hb_001257_040 Hb_004586_120--Hb_001257_040 Hb_125201_010 Hb_125201_010 Hb_004586_120--Hb_125201_010 Hb_000422_050 Hb_000422_050 Hb_004586_120--Hb_000422_050 Hb_005618_020 Hb_005618_020 Hb_004586_120--Hb_005618_020 Hb_000322_020--Hb_000422_050 Hb_002849_030 Hb_002849_030 Hb_000322_020--Hb_002849_030 Hb_000322_020--Hb_001257_040 Hb_000347_360 Hb_000347_360 Hb_000322_020--Hb_000347_360 Hb_032260_100--Hb_029622_080 Hb_000656_350 Hb_000656_350 Hb_032260_100--Hb_000656_350 Hb_000808_090 Hb_000808_090 Hb_032260_100--Hb_000808_090 Hb_007441_150 Hb_007441_150 Hb_032260_100--Hb_007441_150 Hb_000571_030 Hb_000571_030 Hb_032260_100--Hb_000571_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.22686 1253.87 289.664 410.31 0.286107 0.524184
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.90778 7.86788 6.62767 7.76604 42.9362

CAGE analysis