Hb_003071_040

Information

Type transcription factor
Description TF Family: ERF
Location Contig3071: 50347-50973
Sequence    

Annotation

kegg
ID pop:POPTR_0006s14100g
description AP2 domain-containing transcription factor family protein
nr
ID XP_012077091.1
description PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
swissprot
ID Q84QC2
description Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1
trembl
ID A0A067KCS8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07518 PE=4 SV=1
Gene Ontology
ID GO:0005634
description ethylene-responsive transcription factor erf017-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003071_040 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
2 Hb_001098_020 0.0673500839 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
3 Hb_098175_010 0.0848216773 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
4 Hb_000313_190 0.0908066939 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
5 Hb_000731_020 0.0988263822 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
6 Hb_010573_030 0.1017827474 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000529_050 0.1023698648 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
8 Hb_000221_280 0.1026472451 - - PREDICTED: protein EXORDIUM-like [Populus euphratica]
9 Hb_019978_010 0.1075757175 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
10 Hb_172240_010 0.1078044415 - - PREDICTED: uncharacterized protein LOC105795660 [Gossypium raimondii]
11 Hb_004242_160 0.1118590061 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
12 Hb_000417_230 0.1119775414 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001213_140 0.1124640313 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
14 Hb_002422_020 0.1140389101 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
15 Hb_013591_010 0.1145632893 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
16 Hb_001257_120 0.115340499 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
17 Hb_094839_010 0.1164577292 - - conserved hypothetical protein [Ricinus communis]
18 Hb_137612_010 0.1269389735 - - cytochrome P450, putative [Ricinus communis]
19 Hb_073973_180 0.1275000521 - - PREDICTED: WAT1-related protein At4g08290 isoform X1 [Populus euphratica]
20 Hb_004724_290 0.1327264762 transcription factor TF Family: NAC -

Gene co-expression network

sample Hb_003071_040 Hb_003071_040 Hb_001098_020 Hb_001098_020 Hb_003071_040--Hb_001098_020 Hb_098175_010 Hb_098175_010 Hb_003071_040--Hb_098175_010 Hb_000313_190 Hb_000313_190 Hb_003071_040--Hb_000313_190 Hb_000731_020 Hb_000731_020 Hb_003071_040--Hb_000731_020 Hb_010573_030 Hb_010573_030 Hb_003071_040--Hb_010573_030 Hb_000529_050 Hb_000529_050 Hb_003071_040--Hb_000529_050 Hb_004242_160 Hb_004242_160 Hb_001098_020--Hb_004242_160 Hb_001098_020--Hb_000313_190 Hb_001098_020--Hb_000529_050 Hb_073973_180 Hb_073973_180 Hb_001098_020--Hb_073973_180 Hb_094839_010 Hb_094839_010 Hb_001098_020--Hb_094839_010 Hb_172240_010 Hb_172240_010 Hb_098175_010--Hb_172240_010 Hb_011429_010 Hb_011429_010 Hb_098175_010--Hb_011429_010 Hb_000769_030 Hb_000769_030 Hb_098175_010--Hb_000769_030 Hb_098175_010--Hb_010573_030 Hb_003602_080 Hb_003602_080 Hb_098175_010--Hb_003602_080 Hb_000313_190--Hb_000529_050 Hb_001477_080 Hb_001477_080 Hb_000313_190--Hb_001477_080 Hb_000221_280 Hb_000221_280 Hb_000313_190--Hb_000221_280 Hb_000313_190--Hb_000731_020 Hb_000313_190--Hb_004242_160 Hb_000731_020--Hb_000221_280 Hb_019978_010 Hb_019978_010 Hb_000731_020--Hb_019978_010 Hb_006916_220 Hb_006916_220 Hb_000731_020--Hb_006916_220 Hb_004724_310 Hb_004724_310 Hb_000731_020--Hb_004724_310 Hb_007728_010 Hb_007728_010 Hb_010573_030--Hb_007728_010 Hb_002422_020 Hb_002422_020 Hb_010573_030--Hb_002422_020 Hb_137612_010 Hb_137612_010 Hb_010573_030--Hb_137612_010 Hb_013591_010 Hb_013591_010 Hb_010573_030--Hb_013591_010 Hb_000134_010 Hb_000134_010 Hb_010573_030--Hb_000134_010 Hb_010573_030--Hb_094839_010 Hb_000529_050--Hb_001477_080 Hb_000529_050--Hb_000221_280 Hb_004586_120 Hb_004586_120 Hb_000529_050--Hb_004586_120 Hb_000322_020 Hb_000322_020 Hb_000529_050--Hb_000322_020 Hb_032260_100 Hb_032260_100 Hb_000529_050--Hb_032260_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 325.549 71.7597 157.643 0 0.058286
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0946384 0.520689 0 0.578136 12.7541

CAGE analysis