Hb_098175_010

Information

Type -
Description -
Location Contig98175: 31-363
Sequence    

Annotation

kegg
ID rcu:RCOM_0574930
description receptor serine/threonine kinase, putative
nr
ID KDP42829.1
description hypothetical protein JCGZ_23771 [Jatropha curcas]
swissprot
ID O64774
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 OS=Arabidopsis thaliana GN=At1g61460 PE=2 SV=4
trembl
ID A0A067LFF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23771 PE=3 SV=1
Gene Ontology
ID GO:0004674
description receptor serine threonine

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_098175_010 0.0 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
2 Hb_172240_010 0.0719535583 - - PREDICTED: uncharacterized protein LOC105795660 [Gossypium raimondii]
3 Hb_003071_040 0.0848216773 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
4 Hb_011429_010 0.0861705123 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
5 Hb_000769_030 0.0958012255 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_010573_030 0.1011964186 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003602_080 0.1074713247 - - hypothetical protein POPTR_0002s10890g [Populus trichocarpa]
8 Hb_001257_120 0.1079549341 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
9 Hb_010369_010 0.1104285805 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003674_010 0.1168134939 - - purine transporter, putative [Ricinus communis]
11 Hb_004724_290 0.1184117736 transcription factor TF Family: NAC -
12 Hb_002422_020 0.1184960226 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
13 Hb_010012_020 0.119760646 - - conserved hypothetical protein [Ricinus communis]
14 Hb_019978_010 0.1221463136 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
15 Hb_013591_010 0.1231943296 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
16 Hb_039410_010 0.124183122 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
17 Hb_001213_140 0.12711282 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
18 Hb_165552_020 0.1271646704 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
19 Hb_000731_020 0.1290719706 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
20 Hb_009697_010 0.1299771205 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_098175_010 Hb_098175_010 Hb_172240_010 Hb_172240_010 Hb_098175_010--Hb_172240_010 Hb_003071_040 Hb_003071_040 Hb_098175_010--Hb_003071_040 Hb_011429_010 Hb_011429_010 Hb_098175_010--Hb_011429_010 Hb_000769_030 Hb_000769_030 Hb_098175_010--Hb_000769_030 Hb_010573_030 Hb_010573_030 Hb_098175_010--Hb_010573_030 Hb_003602_080 Hb_003602_080 Hb_098175_010--Hb_003602_080 Hb_001257_120 Hb_001257_120 Hb_172240_010--Hb_001257_120 Hb_155015_020 Hb_155015_020 Hb_172240_010--Hb_155015_020 Hb_172240_010--Hb_003071_040 Hb_000201_070 Hb_000201_070 Hb_172240_010--Hb_000201_070 Hb_002811_320 Hb_002811_320 Hb_172240_010--Hb_002811_320 Hb_001098_020 Hb_001098_020 Hb_003071_040--Hb_001098_020 Hb_000313_190 Hb_000313_190 Hb_003071_040--Hb_000313_190 Hb_000731_020 Hb_000731_020 Hb_003071_040--Hb_000731_020 Hb_003071_040--Hb_010573_030 Hb_000529_050 Hb_000529_050 Hb_003071_040--Hb_000529_050 Hb_011429_010--Hb_000769_030 Hb_004724_290 Hb_004724_290 Hb_011429_010--Hb_004724_290 Hb_128460_020 Hb_128460_020 Hb_011429_010--Hb_128460_020 Hb_010369_010 Hb_010369_010 Hb_011429_010--Hb_010369_010 Hb_011429_010--Hb_003602_080 Hb_000769_030--Hb_128460_020 Hb_014361_140 Hb_014361_140 Hb_000769_030--Hb_014361_140 Hb_053935_010 Hb_053935_010 Hb_000769_030--Hb_053935_010 Hb_000769_030--Hb_010369_010 Hb_000769_030--Hb_004724_290 Hb_007728_010 Hb_007728_010 Hb_010573_030--Hb_007728_010 Hb_002422_020 Hb_002422_020 Hb_010573_030--Hb_002422_020 Hb_137612_010 Hb_137612_010 Hb_010573_030--Hb_137612_010 Hb_013591_010 Hb_013591_010 Hb_010573_030--Hb_013591_010 Hb_000134_010 Hb_000134_010 Hb_010573_030--Hb_000134_010 Hb_094839_010 Hb_094839_010 Hb_010573_030--Hb_094839_010 Hb_010012_020 Hb_010012_020 Hb_003602_080--Hb_010012_020 Hb_003602_080--Hb_000769_030 Hb_039410_010 Hb_039410_010 Hb_003602_080--Hb_039410_010 Hb_165552_020 Hb_165552_020 Hb_003602_080--Hb_165552_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 15.6871 3.61232 10.9541 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.37435

CAGE analysis