Hb_155015_020

Information

Type -
Description -
Location Contig155015: 2131-3096
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa026318mg
description hypothetical protein
nr
ID XP_012077051.1
description PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
swissprot
ID Q39214
description Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1
trembl
ID A0A067LB31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17219 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155015_020 0.0 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
2 Hb_002811_320 0.0244063843 - - cation-transporting atpase plant, putative [Ricinus communis]
3 Hb_001198_170 0.0832575914 - - -
4 Hb_001257_120 0.0914616023 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]
5 Hb_112145_010 0.0944182889 - - kinase, putative [Ricinus communis]
6 Hb_172240_010 0.1004024771 - - PREDICTED: uncharacterized protein LOC105795660 [Gossypium raimondii]
7 Hb_000201_070 0.1014290563 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
8 Hb_004241_100 0.1062585219 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
9 Hb_005946_200 0.1078886548 - - hypothetical protein POPTR_0006s16210g [Populus trichocarpa]
10 Hb_026048_030 0.1118393634 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002218_080 0.125500852 - - Ankyrin repeat family protein, putative [Theobroma cacao]
12 Hb_002186_030 0.1269238148 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1 [Populus euphratica]
13 Hb_001518_030 0.1276755752 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_006002_020 0.1278314048 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
15 Hb_006153_020 0.1285030624 - - vacuolar invertase [Manihot esculenta]
16 Hb_002548_020 0.1291197809 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
17 Hb_000127_200 0.1293249062 - - PREDICTED: uncharacterized protein LOC100255537 [Vitis vinifera]
18 Hb_005618_010 0.1299733549 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
19 Hb_113396_010 0.1332632705 - - cytochrome P450, putative [Ricinus communis]
20 Hb_006951_010 0.1346401165 - - PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Populus euphratica]

Gene co-expression network

sample Hb_155015_020 Hb_155015_020 Hb_002811_320 Hb_002811_320 Hb_155015_020--Hb_002811_320 Hb_001198_170 Hb_001198_170 Hb_155015_020--Hb_001198_170 Hb_001257_120 Hb_001257_120 Hb_155015_020--Hb_001257_120 Hb_112145_010 Hb_112145_010 Hb_155015_020--Hb_112145_010 Hb_172240_010 Hb_172240_010 Hb_155015_020--Hb_172240_010 Hb_000201_070 Hb_000201_070 Hb_155015_020--Hb_000201_070 Hb_002811_320--Hb_001198_170 Hb_002811_320--Hb_001257_120 Hb_005946_200 Hb_005946_200 Hb_002811_320--Hb_005946_200 Hb_002811_320--Hb_112145_010 Hb_004241_100 Hb_004241_100 Hb_002811_320--Hb_004241_100 Hb_001198_170--Hb_001257_120 Hb_000127_200 Hb_000127_200 Hb_001198_170--Hb_000127_200 Hb_000358_170 Hb_000358_170 Hb_001198_170--Hb_000358_170 Hb_002548_020 Hb_002548_020 Hb_001198_170--Hb_002548_020 Hb_001257_120--Hb_000358_170 Hb_001257_120--Hb_172240_010 Hb_098175_010 Hb_098175_010 Hb_001257_120--Hb_098175_010 Hb_002170_010 Hb_002170_010 Hb_112145_010--Hb_002170_010 Hb_128216_010 Hb_128216_010 Hb_112145_010--Hb_128216_010 Hb_002303_050 Hb_002303_050 Hb_112145_010--Hb_002303_050 Hb_006951_010 Hb_006951_010 Hb_112145_010--Hb_006951_010 Hb_172240_010--Hb_098175_010 Hb_003071_040 Hb_003071_040 Hb_172240_010--Hb_003071_040 Hb_172240_010--Hb_000201_070 Hb_172240_010--Hb_002811_320 Hb_010267_030 Hb_010267_030 Hb_000201_070--Hb_010267_030 Hb_000201_070--Hb_006951_010 Hb_000201_070--Hb_112145_010 Hb_002186_030 Hb_002186_030 Hb_000201_070--Hb_002186_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.626483 0.250757 0.57228 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.1177

CAGE analysis