Hb_010267_030

Information

Type -
Description -
Location Contig10267: 20355-21423
Sequence    

Annotation

kegg
ID rcu:RCOM_0059770
description DUF26 domain-containing protein 1 precursor, putative
nr
ID XP_002531010.1
description DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
swissprot
ID Q0WPN8
description Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1
trembl
ID B9SYE1
description DUF26 domain-containing protein 1, putative OS=Ricinus communis GN=RCOM_0059770 PE=4 SV=1
Gene Ontology
ID GO:0009506
description cysteine-rich repeat secretory protein 60

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01121: 21021-21641
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010267_030 0.0 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
2 Hb_000201_070 0.0726766117 - - hypothetical protein POPTR_0067s00200g [Populus trichocarpa]
3 Hb_005048_090 0.0860799591 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
4 Hb_000172_070 0.0900478113 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
5 Hb_005618_010 0.1002650908 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
6 Hb_002170_010 0.1005834417 - - hypothetical protein JCGZ_25046 [Jatropha curcas]
7 Hb_112145_010 0.1039711896 - - kinase, putative [Ricinus communis]
8 Hb_000230_550 0.1093487728 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
9 Hb_006951_010 0.1112197862 - - PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Populus euphratica]
10 Hb_001295_050 0.1134983659 - - PREDICTED: uncharacterized protein LOC101503108 isoform X1 [Cicer arietinum]
11 Hb_000365_190 0.1184306485 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
12 Hb_004659_110 0.1240939653 - - PREDICTED: BURP domain-containing protein 3-like [Jatropha curcas]
13 Hb_005643_080 0.1244375544 - - hypothetical protein POPTR_0001s12740g [Populus trichocarpa]
14 Hb_000983_110 0.126772852 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
15 Hb_007292_050 0.1291596393 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
16 Hb_012395_260 0.1311524588 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA13 isoform X1 [Jatropha curcas]
17 Hb_128216_010 0.134448158 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
18 Hb_000604_050 0.1394671582 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
19 Hb_000181_390 0.139831751 - - unknown [Lotus japonicus]
20 Hb_020301_010 0.139964623 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_010267_030 Hb_010267_030 Hb_000201_070 Hb_000201_070 Hb_010267_030--Hb_000201_070 Hb_005048_090 Hb_005048_090 Hb_010267_030--Hb_005048_090 Hb_000172_070 Hb_000172_070 Hb_010267_030--Hb_000172_070 Hb_005618_010 Hb_005618_010 Hb_010267_030--Hb_005618_010 Hb_002170_010 Hb_002170_010 Hb_010267_030--Hb_002170_010 Hb_112145_010 Hb_112145_010 Hb_010267_030--Hb_112145_010 Hb_006951_010 Hb_006951_010 Hb_000201_070--Hb_006951_010 Hb_000201_070--Hb_112145_010 Hb_155015_020 Hb_155015_020 Hb_000201_070--Hb_155015_020 Hb_172240_010 Hb_172240_010 Hb_000201_070--Hb_172240_010 Hb_002186_030 Hb_002186_030 Hb_000201_070--Hb_002186_030 Hb_000984_110 Hb_000984_110 Hb_005048_090--Hb_000984_110 Hb_000230_550 Hb_000230_550 Hb_005048_090--Hb_000230_550 Hb_001295_050 Hb_001295_050 Hb_005048_090--Hb_001295_050 Hb_005048_090--Hb_000172_070 Hb_005048_090--Hb_002170_010 Hb_000172_070--Hb_005618_010 Hb_007292_050 Hb_007292_050 Hb_000172_070--Hb_007292_050 Hb_000172_070--Hb_000230_550 Hb_000172_070--Hb_002170_010 Hb_005618_010--Hb_007292_050 Hb_000181_390 Hb_000181_390 Hb_005618_010--Hb_000181_390 Hb_005618_010--Hb_112145_010 Hb_002725_080 Hb_002725_080 Hb_005618_010--Hb_002725_080 Hb_128216_010 Hb_128216_010 Hb_002170_010--Hb_128216_010 Hb_002170_010--Hb_112145_010 Hb_002170_010--Hb_006951_010 Hb_002534_070 Hb_002534_070 Hb_002170_010--Hb_002534_070 Hb_112145_010--Hb_128216_010 Hb_002303_050 Hb_002303_050 Hb_112145_010--Hb_002303_050 Hb_112145_010--Hb_155015_020 Hb_112145_010--Hb_006951_010 Hb_002811_320 Hb_002811_320 Hb_112145_010--Hb_002811_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.029584 19.5921 4.01286 23.0679 0.0458738 0.0682759
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.429009 5.12308

CAGE analysis