Hb_000984_110

Information

Type -
Description -
Location Contig984: 157612-160861
Sequence    

Annotation

kegg
ID bvg:104884798
description receptor-like protein kinase HSL1
nr
ID KDP41546.1
description hypothetical protein JCGZ_15953 [Jatropha curcas]
swissprot
ID Q9FL51
description Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1
trembl
ID A0A067KZB0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15953 PE=4 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase hsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64538: 157744-157883 , PASA_asmbl_64539: 158017-158394 , PASA_asmbl_64541: 159187-159390 , PASA_asmbl_64542: 159430-159746 , PASA_asmbl_64543: 159850-160827
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_110 0.0 - - hypothetical protein JCGZ_15953 [Jatropha curcas]
2 Hb_005048_090 0.0834939511 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
3 Hb_061783_010 0.1077232794 - - PREDICTED: uncharacterized protein LOC105124983 isoform X4 [Populus euphratica]
4 Hb_000230_550 0.1122549457 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
5 Hb_001295_050 0.1123865064 - - PREDICTED: uncharacterized protein LOC101503108 isoform X1 [Cicer arietinum]
6 Hb_000172_070 0.1186378483 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
7 Hb_004102_200 0.1262799174 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
8 Hb_002170_010 0.1339658562 - - hypothetical protein JCGZ_25046 [Jatropha curcas]
9 Hb_000974_030 0.1368285242 - - PREDICTED: uncharacterized protein LOC105128463 isoform X1 [Populus euphratica]
10 Hb_080601_010 0.1389696639 - - metallothionein 3-like protein [Hevea brasiliensis]
11 Hb_020301_010 0.1422789632 - - cytochrome P450, putative [Ricinus communis]
12 Hb_010267_030 0.1430279808 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
13 Hb_002066_010 0.1437381444 - - PREDICTED: acetylglutamate kinase, chloroplastic [Jatropha curcas]
14 Hb_004450_090 0.1461185262 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
15 Hb_001498_050 0.1465178877 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
16 Hb_003145_030 0.1495133202 - - conserved hypothetical protein [Ricinus communis]
17 Hb_017700_030 0.1560463302 - - PREDICTED: vacuolar amino acid transporter 1 [Jatropha curcas]
18 Hb_100526_020 0.1563297864 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
19 Hb_000227_350 0.1594973207 - - hypothetical protein CICLE_v10006537mg [Citrus clementina]
20 Hb_156850_050 0.1614058525 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]

Gene co-expression network

sample Hb_000984_110 Hb_000984_110 Hb_005048_090 Hb_005048_090 Hb_000984_110--Hb_005048_090 Hb_061783_010 Hb_061783_010 Hb_000984_110--Hb_061783_010 Hb_000230_550 Hb_000230_550 Hb_000984_110--Hb_000230_550 Hb_001295_050 Hb_001295_050 Hb_000984_110--Hb_001295_050 Hb_000172_070 Hb_000172_070 Hb_000984_110--Hb_000172_070 Hb_004102_200 Hb_004102_200 Hb_000984_110--Hb_004102_200 Hb_005048_090--Hb_000230_550 Hb_010267_030 Hb_010267_030 Hb_005048_090--Hb_010267_030 Hb_005048_090--Hb_001295_050 Hb_005048_090--Hb_000172_070 Hb_002170_010 Hb_002170_010 Hb_005048_090--Hb_002170_010 Hb_004450_090 Hb_004450_090 Hb_061783_010--Hb_004450_090 Hb_061783_010--Hb_004102_200 Hb_029238_040 Hb_029238_040 Hb_061783_010--Hb_029238_040 Hb_007545_220 Hb_007545_220 Hb_061783_010--Hb_007545_220 Hb_156850_050 Hb_156850_050 Hb_061783_010--Hb_156850_050 Hb_000230_550--Hb_002170_010 Hb_000230_550--Hb_000172_070 Hb_000230_550--Hb_010267_030 Hb_003145_030 Hb_003145_030 Hb_000230_550--Hb_003145_030 Hb_020301_010 Hb_020301_010 Hb_001295_050--Hb_020301_010 Hb_001295_050--Hb_003145_030 Hb_001295_050--Hb_010267_030 Hb_001295_050--Hb_000172_070 Hb_005618_010 Hb_005618_010 Hb_000172_070--Hb_005618_010 Hb_000172_070--Hb_010267_030 Hb_007292_050 Hb_007292_050 Hb_000172_070--Hb_007292_050 Hb_000172_070--Hb_002170_010 Hb_000983_130 Hb_000983_130 Hb_004102_200--Hb_000983_130 Hb_004102_200--Hb_029238_040 Hb_004102_200--Hb_004450_090 Hb_152277_010 Hb_152277_010 Hb_004102_200--Hb_152277_010 Hb_004102_200--Hb_156850_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0157333 4.46878 0.487258 6.75314 0.0484327 0.0974644
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0226932 0 0.0315015 2.49379

CAGE analysis