Hb_156850_050

Information

Type -
Description -
Location Contig156850: 38580-39485
Sequence    

Annotation

kegg
ID rcu:RCOM_1600680
description hypothetical protein
nr
ID XP_012073676.1
description PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156850_050 0.0 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
2 Hb_029238_040 0.0675928709 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
3 Hb_004102_200 0.102015855 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
4 Hb_007579_030 0.1029470072 - - receptor protein kinase, putative [Ricinus communis]
5 Hb_061783_010 0.1063888121 - - PREDICTED: uncharacterized protein LOC105124983 isoform X4 [Populus euphratica]
6 Hb_001401_120 0.1184996969 - - hypothetical protein JCGZ_04273 [Jatropha curcas]
7 Hb_000096_050 0.1190381102 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000983_130 0.1208603121 - - transcription factor, putative [Ricinus communis]
9 Hb_001680_050 0.1232712711 - - -
10 Hb_026124_020 0.1295002474 - - PREDICTED: uncharacterized protein LOC105644241 isoform X1 [Jatropha curcas]
11 Hb_004450_090 0.1324257096 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
12 Hb_001366_300 0.1335571114 - - GERMIN-LIKE protein 10 [Populus trichocarpa]
13 Hb_029665_010 0.133638258 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
14 Hb_009492_020 0.1359601849 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_148262_010 0.1369992233 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000012_380 0.1376853817 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
17 Hb_002837_080 0.1386798454 - - acyltransferase, putative [Ricinus communis]
18 Hb_003589_100 0.1432225591 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
19 Hb_152277_010 0.1477278105 - - PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic-like [Jatropha curcas]
20 Hb_077774_010 0.149874193 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_156850_050 Hb_156850_050 Hb_029238_040 Hb_029238_040 Hb_156850_050--Hb_029238_040 Hb_004102_200 Hb_004102_200 Hb_156850_050--Hb_004102_200 Hb_007579_030 Hb_007579_030 Hb_156850_050--Hb_007579_030 Hb_061783_010 Hb_061783_010 Hb_156850_050--Hb_061783_010 Hb_001401_120 Hb_001401_120 Hb_156850_050--Hb_001401_120 Hb_000096_050 Hb_000096_050 Hb_156850_050--Hb_000096_050 Hb_029238_040--Hb_004102_200 Hb_029238_040--Hb_001401_120 Hb_000983_130 Hb_000983_130 Hb_029238_040--Hb_000983_130 Hb_029238_040--Hb_007579_030 Hb_004450_090 Hb_004450_090 Hb_029238_040--Hb_004450_090 Hb_004102_200--Hb_000983_130 Hb_004102_200--Hb_004450_090 Hb_152277_010 Hb_152277_010 Hb_004102_200--Hb_152277_010 Hb_004102_200--Hb_061783_010 Hb_001680_050 Hb_001680_050 Hb_007579_030--Hb_001680_050 Hb_007579_030--Hb_001401_120 Hb_029665_010 Hb_029665_010 Hb_007579_030--Hb_029665_010 Hb_001366_300 Hb_001366_300 Hb_007579_030--Hb_001366_300 Hb_000197_260 Hb_000197_260 Hb_007579_030--Hb_000197_260 Hb_061783_010--Hb_004450_090 Hb_061783_010--Hb_029238_040 Hb_007545_220 Hb_007545_220 Hb_061783_010--Hb_007545_220 Hb_000984_110 Hb_000984_110 Hb_061783_010--Hb_000984_110 Hb_148262_010 Hb_148262_010 Hb_001401_120--Hb_148262_010 Hb_009117_020 Hb_009117_020 Hb_001401_120--Hb_009117_020 Hb_026124_020 Hb_026124_020 Hb_001401_120--Hb_026124_020 Hb_001401_120--Hb_001366_300 Hb_100526_020 Hb_100526_020 Hb_000096_050--Hb_100526_020 Hb_000930_020 Hb_000930_020 Hb_000096_050--Hb_000930_020 Hb_000974_030 Hb_000974_030 Hb_000096_050--Hb_000974_030 Hb_002060_070 Hb_002060_070 Hb_000096_050--Hb_002060_070 Hb_000752_040 Hb_000752_040 Hb_000096_050--Hb_000752_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.129645 0.0187747 0.32514 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.183277

CAGE analysis