Hb_002060_070

Information

Type -
Description -
Location Contig2060: 170981-176140
Sequence    

Annotation

kegg
ID pop:POPTR_0075s00210g
description hypothetical protein
nr
ID XP_012067580.1
description PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
swissprot
ID Q7X8C5
description Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1
trembl
ID A0A067L3W3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26946 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002060_070 0.0 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
2 Hb_082972_010 0.0594243703 - - -
3 Hb_001817_110 0.0876348429 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
4 Hb_002837_080 0.0890310499 - - acyltransferase, putative [Ricinus communis]
5 Hb_001379_080 0.1133829841 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
6 Hb_000096_050 0.1204908425 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000930_020 0.1280797899 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
8 Hb_009492_020 0.1307251613 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_043127_010 0.1312995451 - - PREDICTED: uncharacterized protein LOC105648822 [Jatropha curcas]
10 Hb_000805_220 0.1350429513 - - polyprotein [Citrus endogenous pararetrovirus]
11 Hb_012691_060 0.1542349867 - - PREDICTED: isoflavone 2'-hydroxylase-like isoform X1 [Prunus mume]
12 Hb_156850_050 0.1695260387 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
13 Hb_100526_020 0.1695681 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
14 Hb_003589_100 0.1743616773 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
15 Hb_030949_010 0.1833750224 - - hypothetical protein POPTR_0001s24140g [Populus trichocarpa]
16 Hb_000752_040 0.1856963659 - - PREDICTED: uncharacterized protein LOC104884990 [Beta vulgaris subsp. vulgaris]
17 Hb_013407_010 0.1943046231 - - hypothetical protein JCGZ_23575 [Jatropha curcas]
18 Hb_005018_030 0.2007102285 - - hypothetical protein CICLE_v10019811mg [Citrus clementina]
19 Hb_002471_280 0.201409133 - - PREDICTED: cyclin-SDS [Jatropha curcas]
20 Hb_019925_020 0.207432704 - - electron carrier, putative [Ricinus communis]

Gene co-expression network

sample Hb_002060_070 Hb_002060_070 Hb_082972_010 Hb_082972_010 Hb_002060_070--Hb_082972_010 Hb_001817_110 Hb_001817_110 Hb_002060_070--Hb_001817_110 Hb_002837_080 Hb_002837_080 Hb_002060_070--Hb_002837_080 Hb_001379_080 Hb_001379_080 Hb_002060_070--Hb_001379_080 Hb_000096_050 Hb_000096_050 Hb_002060_070--Hb_000096_050 Hb_000930_020 Hb_000930_020 Hb_002060_070--Hb_000930_020 Hb_082972_010--Hb_001817_110 Hb_082972_010--Hb_002837_080 Hb_043127_010 Hb_043127_010 Hb_082972_010--Hb_043127_010 Hb_012691_060 Hb_012691_060 Hb_082972_010--Hb_012691_060 Hb_082972_010--Hb_001379_080 Hb_001817_110--Hb_043127_010 Hb_001817_110--Hb_002837_080 Hb_013407_010 Hb_013407_010 Hb_001817_110--Hb_013407_010 Hb_001817_110--Hb_012691_060 Hb_002837_080--Hb_043127_010 Hb_002837_080--Hb_013407_010 Hb_009492_020 Hb_009492_020 Hb_002837_080--Hb_009492_020 Hb_000805_220 Hb_000805_220 Hb_001379_080--Hb_000805_220 Hb_001379_080--Hb_002837_080 Hb_001379_080--Hb_000930_020 Hb_100526_020 Hb_100526_020 Hb_001379_080--Hb_100526_020 Hb_000096_050--Hb_100526_020 Hb_000096_050--Hb_000930_020 Hb_000974_030 Hb_000974_030 Hb_000096_050--Hb_000974_030 Hb_156850_050 Hb_156850_050 Hb_000096_050--Hb_156850_050 Hb_000752_040 Hb_000752_040 Hb_000096_050--Hb_000752_040 Hb_000930_020--Hb_000805_220 Hb_000930_020--Hb_100526_020 Hb_000930_020--Hb_009492_020 Hb_000930_020--Hb_000974_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0242121 0 0.035892 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0369692

CAGE analysis